Basic Information:

  VIRBase ID:  

VHID00628833

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Slc46a3:  NM_001357002     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Slc46a3
miRBase Accession/Entrez ID	MIMAT0001564	71706
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1200006F02Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc46a3	chr5:147878585-147878586(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr5:147878699-147878700(-) m6A 3'UTR//exon       25456834//24981863//22608085//22575960 chr5:147878710-147878711(-) m6A 3'UTR//exon       25683224//25456834//24981863//22608085//22575960 chr5:147878740-147878741(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//22608085//22575960 chr5:147878749-147878750(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//22608085//22575960 chr5:147878785-147878786(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//22608085//22575960 chr5:147878817-147878818(-) m6A 3'UTR//exon       25456834//25412662//24981863//26404942//22608085//22575960 chr5:147878877-147878878(-) m6A 3'UTR//exon       25456834//25412662//24981863//26404942//22608085//22575960 chr5:147878882-147878883(-) m6A 3'UTR//exon       25456834//25412662//24981863//26404942//22608085//22575960 chr5:147878916-147878917(-) m6A 3'UTR//exon       25412662//24981863//26404942//22608085 chr5:147878974-147878975(-) m6A 3'UTR//exon       24981863 chr5:147886297-147886298(-) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr5:147886311-147886312(-) m6A CDS       25456834//24981863//25569111//22608085//22575960 chr5:147886451-147886452(-) m6A CDS       25456834//22608085 chr5:147894493-147894494(-) m6A 5'UTR//intron       25412662 chr5:147894539-147894540(-) m6A 5'UTR//intron       25412662 chr5:147894576-147894577(-) m6A 5'UTR//intron       25412662 chr5:147894588-147894589(-) m6A 5'UTR//intron       25412662 chr5:147894737-147894738(-) m6A 5'UTR       25412662//24981863 chr5:147894770-147894771(-) m6A 5'UTR       24981863//25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slc46a3	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Slc46a3

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar