Basic Information:

  VIRBase ID:  

VHID00628719

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Camsap2:  NM_001347110     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Camsap2
miRBase Accession/Entrez ID	MIMAT0001564	67886
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1600013L13Rik//4930541M15Rik//Cams//Camsap1l1//mKIAA1078

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Camsap2	chr1:136268424-136268425(-) m6A 3'UTR       25683224//24981863//25569111 chr1:136268483-136268484(-) m6A 3'UTR       24981863 chr1:136268914-136268915(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr1:136268922-136268923(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr1:136268933-136268934(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr1:136269041-136269042(-) m6A 3'UTR       25456834//24981863//26404942 chr1:136269057-136269058(-) m6A 3'UTR       24981863//26404942 chr1:136269072-136269073(-) m6A 3'UTR       24981863//26404942 chr1:136269107-136269108(-) m6A 3'UTR       24981863 chr1:136269682-136269683(-) m6A 3'UTR       24981863//22608085 chr1:136269701-136269702(-) m6A 3'UTR       24981863//22608085 chr1:136270068-136270069(-) m6A 3'UTR       22608085 chr1:136270317-136270318(-) m6A 3'UTR       25569111//22608085 chr1:136270540-136270541(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:136270550-136270551(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr1:136270575-136270576(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr1:136270708-136270709(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136270729-136270730(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136270734-136270735(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136270771-136270772(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136270816-136270817(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr1:136270862-136270863(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr1:136270880-136270881(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr1:136270888-136270889(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr1:136270939-136270940(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr1:136270964-136270965(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr1:136270991-136270992(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr1:136271039-136271040(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136271056-136271057(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136271608-136271609(-) m6A CDS       25456834//24981863//25569111 chr1:136271629-136271630(-) m6A CDS       25569111 chr1:136273761-136273762(-) m6A CDS       25683224//25569111//22608085 chr1:136273802-136273803(-) m6A CDS       25683224//25569111//22608085 chr1:136274845-136274846(-) m6A CDS       25683224//25569111 chr1:136276558-136276559(-) m6A CDS       24981863 chr1:136276604-136276605(-) m6A CDS       25683224//25412662//24981863 chr1:136276613-136276614(-) m6A CDS       25683224//25412662//24981863 chr1:136276653-136276654(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr1:136276664-136276665(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr1:136276673-136276674(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr1:136276750-136276751(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:136277251-136277252(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:136280350-136280351(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:136280407-136280408(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr1:136280473-136280474(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:136280507-136280508(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr1:136280532-136280533(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr1:136280581-136280582(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:136280617-136280618(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:136280625-136280626(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:136280668-136280669(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136280721-136280722(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136280796-136280797(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136280801-136280802(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136280838-136280839(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr1:136280915-136280916(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr1:136280956-136280957(-) m6A CDS       25683224//24981863//25569111//22608085 chr1:136280962-136280963(-) m6A CDS       25683224//24981863//25569111 chr1:136281153-136281154(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136281176-136281177(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136281237-136281238(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136281257-136281258(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136281280-136281281(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136281317-136281318(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:136281411-136281412(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:136281433-136281434(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:136281542-136281543(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:136281610-136281611(-) m6A CDS       25683224//25412662//24981863//25569111 chr1:136281630-136281631(-) m6A CDS       25683224//25412662//24981863//25569111 chr1:136281818-136281819(-) m6A CDS       25683224//24981863//25569111 chr1:136281854-136281855(-) m6A CDS       25683224//24981863//25569111//26404942 chr1:136281887-136281888(-) m6A CDS       25683224//24981863//25569111//26404942 chr1:136281900-136281901(-) m6A CDS       25683224//24981863//25569111//26404942 chr1:136281911-136281912(-) m6A CDS       25683224//24981863//25569111//26404942 chr1:136281953-136281954(-) m6A CDS       24981863//25569111//26404942 chr1:136282010-136282011(-) m6A CDS       24981863//25569111//26404942 chr1:136282102-136282103(-) m6A CDS       25412662//24981863//25569111 chr1:136282187-136282188(-) m6A CDS       25412662//24981863//25456834//25569111//26404942//22608085 chr1:136282235-136282236(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136282240-136282241(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr1:136297789-136297790(-) m6A CDS       24981863//22608085 chr1:136297795-136297796(-) m6A CDS       24981863//22608085 chr1:136297805-136297806(-) m6A CDS       24981863//22608085 chr1:136297816-136297817(-) m6A CDS       24981863//22608085 chr1:136324778-136324779(-) m6A CDS       25683224//22608085 chr1:136324931-136324932(-) m6A CDS       25683224//25569111//22608085 chr1:136324956-136324957(-) m6A CDS       25683224//25569111//22608085 chr1:136345301-136345302(-) m6A CDS//exon       25412662//24981863//25569111 chr1:136345377-136345378(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr1:136345420-136345421(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111 chr1:136345501-136345502(-) m6A 5'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr1:136345574-136345575(-) m6A 5'UTR//exon       25412662//24981863//25456834//25569111 chr1:136345651-136345652(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111 chr1:136345674-136345675(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111 chr1:136345771-136345772(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111 chr1:136346009-136346010(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111 chr1:136346086-136346087(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Camsap2	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Camsap2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar