Basic Information:

  VIRBase ID:  

VHID00628670

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Mastl:  NM_025979     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Mastl
miRBase Accession/Entrez ID	MIMAT0001564	67121
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2700091H24Rik//C88295//GW//GWL//MAST-L//THC2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mastl	chr2:23117822-23117823(-) m6A 3'UTR       24981863//25456834 chr2:23117835-23117836(-) m6A 3'UTR       24981863//25456834 chr2:23117870-23117871(-) m6A 3'UTR       24981863//25456834 chr2:23117886-23117887(-) m6A 3'UTR       24981863 chr2:23131781-23131782(-) m6A CDS       24981863//25569111 chr2:23131793-23131794(-) m6A CDS       24981863//25569111 chr2:23132703-23132704(-) m6A CDS       24981863//25569111 chr2:23132741-23132742(-) m6A CDS       24981863//25569111 chr2:23132856-23132857(-) m6A CDS       25456834//24981863//25569111 chr2:23132934-23132935(-) m6A CDS       25456834//24981863//25569111 chr2:23132939-23132940(-) m6A CDS       25456834//24981863//25569111 chr2:23132955-23132956(-) m6A CDS       25456834//24981863//25569111 chr2:23132975-23132976(-) m6A CDS       25456834//24981863//25569111 chr2:23133052-23133053(-) m6A CDS       25683224//25456834//24981863//25569111 chr2:23133102-23133103(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:23133126-23133127(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:23133137-23133138(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:23133150-23133151(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:23133176-23133177(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:23133191-23133192(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:23133216-23133217(-) m6A CDS       25683224//25456834//24981863//25569111 chr2:23133270-23133271(-) m6A CDS       25683224//25456834//24981863//25569111 chr2:23133351-23133352(-) m6A CDS       25683224//25456834//24981863//25569111 chr2:23133434-23133435(-) m6A CDS       25456834//24981863//25569111 chr2:23133494-23133495(-) m6A CDS       25456834//24981863//25569111 chr2:23133513-23133514(-) m6A CDS       25456834//24981863//25569111 chr2:23133528-23133529(-) m6A CDS       25456834//24981863//25569111 chr2:23133641-23133642(-) m6A CDS       25683224//25456834//24981863//25569111 chr2:23133646-23133647(-) m6A CDS       25683224//25456834//24981863//25569111 chr2:23133652-23133653(-) m6A CDS       25683224//25456834//24981863//25569111 chr2:23136737-23136738(-) m6A exon//intron       25456834//24981863//25569111 chr2:23136791-23136792(-) m6A exon//intron       24981863//25569111 chr2:23136806-23136807(-) m6A exon//intron       24981863//25569111 chr2:23136826-23136827(-) m6A exon//intron       24981863//25569111 chr2:23136877-23136878(-) m6A CDS//exon       24981863//25569111 chr2:23136966-23136967(-) m6A CDS//exon       25569111 chr2:23155708-23155709(-) m6A CDS//exon       - chr2:23155780-23155781(-) m6A CDS//exon       24981863//25569111 chr2:23155913-23155914(-) m6A 5'UTR       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Mastl	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Mastl

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar