Detail Information

Basic Information:


  VIRBase ID:  

VHID00628592

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Suv39h2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Suv39h2
miRBase
Accession/Entrez ID
MIMAT0001564 64707
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 4930507K23Rik//AA536750//D030054H19Rik//D2Ertd544//D2Ertd544e//KMT1B

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Suv39h2
chr2:3457529-3457530(-) m6A 3'UTR       24981863
chr2:3457534-3457535(-) m6A 3'UTR       24981863
chr2:3457589-3457590(-) m6A 3'UTR       24981863
chr2:3457605-3457606(-) m6A 3'UTR       24981863
chr2:3457934-3457935(-) m6A 3'UTR       -
chr2:3458348-3458349(-) m6A 3'UTR       24981863//25456834
chr2:3458392-3458393(-) m6A 3'UTR       24981863//25456834
chr2:3458441-3458442(-) m6A 3'UTR       25456834//24981863//22608085
chr2:3458538-3458539(-) m6A 3'UTR       25456834//24981863//22608085
chr2:3458563-3458564(-) m6A 3'UTR       25456834//24981863//22608085
chr2:3458569-3458570(-) m6A 3'UTR       25456834//24981863//22608085
chr2:3458574-3458575(-) m6A 3'UTR       25456834//24981863
chr2:3458645-3458646(-) m6A 3'UTR//CDS       24981863
chr2:3458669-3458670(-) m6A 3'UTR//CDS       24981863//25569111
chr2:3458707-3458708(-) m6A 3'UTR//CDS       25569111
chr2:3462594-3462595(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111
chr2:3464316-3464317(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111
chr2:3464346-3464347(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr2:3464407-3464408(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr2:3464531-3464532(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr2:3464564-3464565(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr2:3464612-3464613(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr2:3464642-3464643(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr2:3464669-3464670(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr2:3464808-3464809(-) m6A 3'UTR//CDS//intron       25456834//24981863//25569111
chr2:3464855-3464856(-) m6A CDS//intron       24981863//25569111
chr2:3464876-3464877(-) m6A CDS//intron       24981863//25569111
chr2:3472544-3472545(-) m6A CDS//intron       25569111
chr2:3474828-3474829(-) m6A CDS       25412662//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Suv39h2

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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