Basic Information:

  VIRBase ID:  

VHID00628591

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Gpr85:  NM_001330667     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Gpr85
miRBase Accession/Entrez ID	MIMAT0001564	64450
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2900026B03Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gpr85	chr6:13835254-13835255(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835315-13835316(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835331-13835332(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835360-13835361(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835368-13835369(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835435-13835436(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835449-13835450(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835459-13835460(-) m6A 3'UTR       24981863//26404942//22608085 chr6:13835533-13835534(-) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr6:13835564-13835565(-) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr6:13835569-13835570(-) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr6:13835703-13835704(-) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr6:13835758-13835759(-) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr6:13835808-13835809(-) m6A CDS       25683224//24981863//25569111//26404942//22608085 chr6:13836218-13836219(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr6:13836223-13836224(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr6:13836464-13836465(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr6:13836632-13836633(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:13836641-13836642(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:13836706-13836707(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:13836755-13836756(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr6:13836834-13836835(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr6:13836895-13836896(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr6:13836939-13836940(-) m6A 5'UTR       25683224//25456834//24981863//25569111//22608085 chr6:13837129-13837130(-) m6A 5'UTR//intron       24981863 chr6:13838337-13838338(-) m6A 5'UTR//intron       24981863 chr6:13838363-13838364(-) m6A 5'UTR//intron       24981863 chr6:13838406-13838407(-) m6A 5'UTR//intron       24981863 chr6:13838430-13838431(-) m6A 5'UTR//intron       24981863 chr6:13838827-13838828(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr6:13838857-13838858(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr6:13838862-13838863(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr6:13838867-13838868(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr6:13838894-13838895(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr6:13839098-13839099(-) m6A 5'UTR//exon       24981863//25412662 chr6:13839467-13839468(-) m6A exon//intron       24981863 chr6:13839646-13839647(-) m6A 5'UTR       24981863 chr6:13839664-13839665(-) m6A 5'UTR       24981863 chr6:13839731-13839732(-) m6A 5'UTR       24981863 chr6:13839834-13839835(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Gpr85	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Gpr85

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar