Basic Information:

  VIRBase ID:  

VHID00628519

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Stk3:  NM_019635     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Stk3
miRBase Accession/Entrez ID	MIMAT0001564	56274
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	0610042I06Rik//mes//mess1//MS//MST//Mst2//Mst3//Ste2//Ste20

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Stk3	chr15:34875610-34875611(-) m6A 3'UTR       25456834 chr15:34875653-34875654(-) m6A 3'UTR       25456834 chr15:34875702-34875703(-) m6A 3'UTR       24981863//25456834 chr15:34875717-34875718(-) m6A 3'UTR       25456834//24981863 chr15:34875723-34875724(-) m6A 3'UTR       25456834//24981863 chr15:34875729-34875730(-) m6A 3'UTR       25456834//24981863 chr15:34875738-34875739(-) m6A 3'UTR       25456834//24981863 chr15:34875799-34875800(-) m6A 3'UTR       25456834 chr15:34875892-34875893(-) m6A 3'UTR       25456834//24981863 chr15:34875899-34875900(-) m6A 3'UTR       25456834//24981863 chr15:34875936-34875937(-) m6A 3'UTR       25456834//24981863 chr15:34875953-34875954(-) m6A 3'UTR       25456834//24981863//22608085 chr15:34875990-34875991(-) m6A 3'UTR       25456834//24981863//22608085 chr15:34876052-34876053(-) m6A 3'UTR       24981863//25456834//25569111//22608085 chr15:34876068-34876069(-) m6A 3'UTR       24981863//25456834//25569111//22608085 chr15:34876073-34876074(-) m6A 3'UTR       24981863//25456834//25569111//22608085 chr15:34876104-34876105(-) m6A 3'UTR       24981863//25456834 chr15:34876182-34876183(-) m6A 3'UTR       24981863 chr15:34876386-34876387(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:34876416-34876417(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:34876467-34876468(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:34876512-34876513(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:34876557-34876558(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:34876629-34876630(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:34876715-34876716(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:34876742-34876743(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:34876770-34876771(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:34876796-34876797(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:34945015-34945016(-) m6A CDS       25683224//25412662//24981863//25569111 chr15:34945111-34945112(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:34945120-34945121(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:34945138-34945139(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:34945152-34945153(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:34958653-34958654(-) m6A exon//intron       25683224//25456834//25412662 chr15:34958707-34958708(-) m6A exon//intron       25412662 chr15:34958806-34958807(-) m6A exon//intron       24981863//25456834 chr15:34958874-34958875(-) m6A CDS//exon       25412662//24981863//25456834 chr15:34958921-34958922(-) m6A CDS//exon       25412662//24981863 chr15:34958934-34958935(-) m6A CDS//exon       25412662//24981863 chr15:34958942-34958943(-) m6A CDS//exon       25412662//24981863 chr15:34958968-34958969(-) m6A CDS//exon       25412662//24981863 chr15:34999834-34999835(-) m6A CDS//exon       25412662//24981863 chr15:34999912-34999913(-) m6A CDS//exon       24981863//22608085 chr15:34999932-34999933(-) m6A CDS       24981863//22608085 chr15:35155711-35155712(-) m6A 5'UTR       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Stk3	Exosome Mast cells     17486113 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Stk3

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar