Detail Information

Basic Information:


  VIRBase ID:  

VHID00628082

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Kras:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Kras
miRBase
Accession/Entrez ID		 MIMAT0001564 16653
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AI929937//c-K-ras//c-Ki-ras//K-//K-ras//K-Ras//K-Ras 2//Ki//Ki-ras//Kr//Kra//Kras-2//Kras2//p21B//ras

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Kras
chr6:145219135-145219136(-) m6A 3'UTR       24981863//26404942
chr6:145219196-145219197(-) m6A 3'UTR       24981863//26404942
chr6:145219205-145219206(-) m6A 3'UTR       24981863//26404942
chr6:145220112-145220113(-) m6A 3'UTR//exon       25456834//24981863//25569111
chr6:145220141-145220142(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085
chr6:145220179-145220180(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085
chr6:145220196-145220197(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085
chr6:145220264-145220265(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085
chr6:145220298-145220299(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220359-145220360(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220366-145220367(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220373-145220374(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220395-145220396(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220401-145220402(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220441-145220442(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220450-145220451(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085
chr6:145220487-145220488(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr6:145220627-145220628(-) m6A 3'UTR//CDS//exon       24981863//25456834//25569111
chr6:145220679-145220680(-) m6A 3'UTR//CDS//exon       24981863//25456834//25569111
chr6:145225118-145225119(-) m6A CDS//exon//intron       24981863//25569111
chr6:145232097-145232098(-) m6A 3'UTR//CDS//intron       -
chr6:145232102-145232103(-) m6A 3'UTR//CDS//intron       -
chr6:145232114-145232115(-) m6A 3'UTR//CDS//intron       24981863
chr6:145232160-145232161(-) m6A 3'UTR//CDS//intron       24981863
chr6:145232167-145232168(-) m6A 3'UTR//CDS//intron       24981863
chr6:145232174-145232175(-) m6A 3'UTR//CDS//intron       24981863
chr6:145232230-145232231(-) m6A 3'UTR//CDS//intron       24981863//25569111
chr6:145232250-145232251(-) m6A CDS//intron       24981863//25569111
chr6:145234317-145234318(-) m6A CDS//intron       25569111
chr6:145234331-145234332(-) m6A CDS//intron       25569111
chr6:145234389-145234390(-) m6A CDS//intron       25569111//22608085
chr6:145234411-145234412(-) m6A CDS//intron       25569111//22608085
chr6:145246790-145246791(-) m6A CDS       25569111//22608085
chr6:145247288-145247289(-) m6A 5'UTR//intron       25412662//24981863//25569111//22608085
chr6:145250124-145250125(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Kras

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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