Detail Information

Basic Information:


  VIRBase ID:  

VHID00627753

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:           Tmem204:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-2-3p Tmem204
miRBase
Accession/Entrez ID
MIMAT0005561 407831
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - Clp24

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Tmem204
chr17:25058322-25058323(-) m6A CDS       24981863//22575960
chr17:25078164-25078165(-) m6A 5'UTR//intron       25456834//24981863
chr17:25078173-25078174(-) m6A 5'UTR//intron       25456834//24981863
chr17:25080337-25080338(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr17:25080350-25080351(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr17:25080356-25080357(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr17:25080385-25080386(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr17:25080561-25080562(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22575960
chr17:25080575-25080576(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22575960
chr17:25080582-25080583(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22575960
chr17:25080715-25080716(-) m6A 5'UTR       25683224//25412662//24981863//25569111
chr17:25080740-25080741(-) m6A 5'UTR       25412662//24981863//25569111
chr17:25080792-25080793(-) m6A 5'UTR       25456834//25412662//24981863//25569111
chr17:25080901-25080902(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr17:25081011-25081012(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr17:25081047-25081048(-) m6A 5'UTR       25683224//25412662//24981863//25569111
chr17:25081103-25081104(-) m6A 5'UTR       25683224//24981863

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-2-3p
Interactor2: Tmem204

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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