Basic Information:

  VIRBase ID:  

VHID00627722

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Zc3h4:  NM_198631     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Zc3h4
miRBase Accession/Entrez ID	MIMAT0005561	330474
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Bwq1//Gm768//Kiaa1064-hp

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zc3h4	chr7:16402497-16402498(+) m6A CDS//intron       25683224//25412662 chr7:16414864-16414865(+) m6A exon//intron       25683224//25412662 chr7:16415744-16415745(+) m6A exon//intron       25683224 chr7:16415754-16415755(+) m6A exon//intron       25683224 chr7:16416021-16416022(+) m6A exon//intron       25683224 chr7:16416049-16416050(+) m6A exon//intron       25683224 chr7:16416799-16416800(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr7:16416831-16416832(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr7:16416844-16416845(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr7:16416935-16416936(+) m1A CDS//exon       26863196 chr7:16417321-16417322(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr7:16417378-16417379(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr7:16417437-16417438(+) m6A exon//intron       25683224//24981863 chr7:16417459-16417460(+) m6A exon//intron       25683224//24981863 chr7:16418364-16418365(+) m6A exon//intron       24981863 chr7:16418372-16418373(+) m6A exon//intron       25412662//24981863 chr7:16418377-16418378(+) m6A exon//intron       25412662//24981863 chr7:16420248-16420249(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16420296-16420297(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16420311-16420312(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16420333-16420334(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16420338-16420339(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16421484-16421485(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16422249-16422250(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16422270-16422271(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16422494-16422495(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr7:16425799-16425800(+) m6A CDS       25683224//24981863 chr7:16429208-16429209(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16429267-16429268(+) m6A CDS       25683224//25569111 chr7:16429539-16429540(+) m6A CDS       25412662 chr7:16429548-16429549(+) m6A CDS       25412662 chr7:16429584-16429585(+) m6A CDS       25412662 chr7:16429605-16429606(+) m6A CDS       25412662 chr7:16429643-16429644(+) m6A CDS       25412662//24981863 chr7:16429739-16429740(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16429796-16429797(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:16429841-16429842(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr7:16429853-16429854(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr7:16432776-16432777(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr7:16433004-16433005(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr7:16434032-16434033(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:16434088-16434089(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16434135-16434136(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16434177-16434178(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434221-16434222(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434228-16434229(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434247-16434248(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434272-16434273(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434372-16434373(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434428-16434429(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434440-16434441(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434453-16434454(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434467-16434468(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434554-16434555(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16434563-16434564(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16434677-16434678(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434741-16434742(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434763-16434764(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16434823-16434824(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr7:16435054-16435055(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435075-16435076(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435198-16435199(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435235-16435236(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435369-16435370(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435390-16435391(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435791-16435792(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435802-16435803(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435877-16435878(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:16435973-16435974(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16436132-16436133(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr7:16436143-16436144(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16436179-16436180(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16436242-16436243(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16436277-16436278(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:16436456-16436457(+) m6A 3'UTR       - chr7:16436511-16436512(+) m6A 3'UTR       - chr7:16437296-16437297(+) m6A 3'UTR       24981863 chr7:16437381-16437382(+) m6A 3'UTR       25683224//24981863//25569111 chr7:16437395-16437396(+) m6A 3'UTR       25683224//24981863//25569111 chr7:16437411-16437412(+) m6A 3'UTR       25683224//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Zc3h4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar