Basic Information:

  VIRBase ID:  

VHID00627555

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Rtn4rl1:  NM_177708     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Rtn4rl1
miRBase Accession/Entrez ID	MIMAT0005561	237847
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Ng//Ngr//Ngr3//Ngrh2//Ngrl2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rtn4rl1	chr11:75264825-75264826(+) m6A CDS       25683224//25456834//24981863//22608085 chr11:75264906-75264907(+) m6A CDS       25683224//25456834//24981863//22608085 chr11:75264930-75264931(+) m6A CDS       25683224//24981863//22608085 chr11:75265059-75265060(+) m6A CDS       24981863//22608085//22575960 chr11:75265068-75265069(+) m6A CDS       24981863//22608085//22575960 chr11:75265100-75265101(+) m6A CDS       24981863//22608085//22575960 chr11:75265150-75265151(+) m6A CDS       24981863//22608085//22575960 chr11:75265215-75265216(+) m6A CDS       24981863//22608085 chr11:75265254-75265255(+) m6A CDS       24981863//22608085 chr11:75265335-75265336(+) m6A CDS       25456834//24981863//22608085 chr11:75265341-75265342(+) m6A CDS       25456834//24981863//22608085 chr11:75265362-75265363(+) m6A CDS       25456834//24981863//22608085 chr11:75265515-75265516(+) m6A CDS       25683224//25412662//24981863//25569111//22575960 chr11:75265641-75265642(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr11:75265650-75265651(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr11:75265660-75265661(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr11:75265755-75265756(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75265818-75265819(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75265836-75265837(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75265842-75265843(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75265882-75265883(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75265890-75265891(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75265976-75265977(+) m6A CDS       25683224//25456834//24981863//22608085//22575960 chr11:75266083-75266084(+) m6A 3'UTR       24981863//22608085 chr11:75266127-75266128(+) m6A 3'UTR       24981863//22608085 chr11:75266233-75266234(+) m6A 3'UTR       25456834//24981863//25569111//22608085//22575960 chr11:75266325-75266326(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75266386-75266387(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75266451-75266452(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75266477-75266478(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75266484-75266485(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:75266651-75266652(+) m6A 3'UTR       25456834//24981863//22608085 chr11:75266669-75266670(+) m6A 3'UTR       25456834//24981863//22608085 chr11:75266711-75266712(+) m6A 3'UTR       24981863//22608085 chr11:75266859-75266860(+) m6A 3'UTR       24981863//22608085 chr11:75266884-75266885(+) m6A 3'UTR       24981863//22608085 chr11:75266895-75266896(+) m6A 3'UTR       24981863//22608085 chr11:75266917-75266918(+) m6A 3'UTR       25683224//24981863//22608085 chr11:75266951-75266952(+) m6A 3'UTR       25683224//24981863//22608085 chr11:75266958-75266959(+) m6A 3'UTR       25683224//24981863//22608085 chr11:75266979-75266980(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Rtn4rl1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar