Basic Information:

  VIRBase ID:  

VHID00627519

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Prc1:  NM_001382387     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Prc1
miRBase Accession/Entrez ID	MIMAT0005561	233406
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	D7Ertd348//D7Ertd348e

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Prc1	chr7:80294486-80294487(+) m6A 5'UTR//exon       24981863//25569111 chr7:80294561-80294562(+) m6A 5'UTR//exon       24981863//25569111 chr7:80300369-80300370(+) m6A CDS//exon       25569111 chr7:80300406-80300407(+) m6A CDS//exon       - chr7:80301168-80301169(+) m6A exon//intron       24981863 chr7:80301199-80301200(+) m6A exon//intron       24981863 chr7:80304061-80304062(+) m6A exon//intron       25683224 chr7:80304104-80304105(+) m6A exon//intron       25683224 chr7:80304113-80304114(+) m6A exon//intron       25683224 chr7:80304149-80304150(+) m6A exon//intron       25683224 chr7:80304170-80304171(+) m6A exon//intron       25683224 chr7:80304198-80304199(+) m6A exon//intron       25683224 chr7:80304297-80304298(+) m6A exon//intron       24981863 chr7:80304428-80304429(+) m6A CDS//exon       24981863 chr7:80304452-80304453(+) m6A CDS//exon       - chr7:80304470-80304471(+) m6A CDS//exon       - chr7:80304482-80304483(+) m6A CDS//exon       - chr7:80304520-80304521(+) m6A CDS//exon       - chr7:80304715-80304716(+) m6A CDS//exon       - chr7:80304745-80304746(+) m6A CDS//exon       25412662 chr7:80304819-80304820(+) m6A CDS//exon       25412662 chr7:80306049-80306050(+) m6A CDS//exon       24981863 chr7:80306403-80306404(+) m6A CDS//exon       24981863 chr7:80306417-80306418(+) m6A CDS//exon       24981863 chr7:80306468-80306469(+) m6A CDS//exon       24981863 chr7:80306490-80306491(+) m6A CDS//exon       - chr7:80307561-80307562(+) m6A CDS//exon       - chr7:80307573-80307574(+) m6A CDS//exon       - chr7:80307615-80307616(+) m6A CDS//exon       - chr7:80307676-80307677(+) m6A CDS//exon       25412662 chr7:80309423-80309424(+) m6A CDS//exon//intron       25412662//24981863 chr7:80309476-80309477(+) m6A CDS//exon//intron       25412662//24981863 chr7:80310769-80310770(+) m6A CDS//exon       25412662//24981863 chr7:80310778-80310779(+) m6A CDS//exon       25412662//24981863 chr7:80310838-80310839(+) m6A CDS//exon       25412662//24981863 chr7:80310877-80310878(+) m6A CDS//exon       25412662//24981863 chr7:80311079-80311080(+) m6A CDS//exon       25412662//24981863 chr7:80311086-80311087(+) m6A CDS//exon       25412662//24981863 chr7:80311126-80311127(+) m6A CDS//exon       25412662//24981863 chr7:80311140-80311141(+) m6A CDS//exon       25412662//24981863 chr7:80311146-80311147(+) m6A CDS//exon       25412662//24981863 chr7:80311184-80311185(+) m6A exon//intron       25412662//24981863 chr7:80315227-80315228(+) m6A 3'UTR       25569111 chr7:80315232-80315233(+) m6A 3'UTR       25569111 chr7:80315248-80315249(+) m6A 3'UTR       24981863//25569111 chr7:80315291-80315292(+) m6A 3'UTR       24981863//25569111 chr7:80315341-80315342(+) m6A 3'UTR       25683224//24981863//25456834//25569111 chr7:80315365-80315366(+) m6A 3'UTR       25683224//24981863//25456834//25569111 chr7:80315380-80315381(+) m6A 3'UTR       25683224//24981863//25456834//25569111 chr7:80315402-80315403(+) m6A 3'UTR       25683224//24981863//25456834//25569111 chr7:80316175-80316176(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Prc1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Prc1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar