Basic Information:

  VIRBase ID:  

VHID00627470

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Frmd5:  NM_001360084     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Frmd5
miRBase Accession/Entrez ID	MIMAT0005561	228564
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1500032A09Rik//A930004K21Rik//R75430

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Frmd5	chr2:121606467(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Frmd5	chr2:121780731(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Frmd5	chr2:121546172-121546173(-) m6A 3'UTR       24981863//25456834//25569111 chr2:121546243-121546244(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr2:121546257-121546258(-) m6A 3'UTR       25456834//24981863//22608085 chr2:121546281-121546282(-) m6A 3'UTR       25683224//25456834//24981863//22608085 chr2:121546355-121546356(-) m6A 3'UTR       25456834//24981863//22608085 chr2:121546380-121546381(-) m6A 3'UTR       25456834//24981863//22608085 chr2:121546399-121546400(-) m6A 3'UTR       24981863//22608085 chr2:121546475-121546476(-) m6A 3'UTR       24981863//22608085 chr2:121546565-121546566(-) m6A 3'UTR       24981863 chr2:121546619-121546620(-) m6A 3'UTR       24981863 chr2:121546644-121546645(-) m6A 3'UTR       24981863 chr2:121546673-121546674(-) m6A 3'UTR       24981863 chr2:121547522-121547523(-) m6A 3'UTR       24981863 chr2:121547568-121547569(-) m6A 3'UTR//CDS       24981863 chr2:121547588-121547589(-) m6A 3'UTR//CDS       24981863 chr2:121547634-121547635(-) m6A 3'UTR//CDS       24981863 chr2:121548195-121548196(-) m6A 3'UTR//intron       24981863 chr2:121548250-121548251(-) m6A 3'UTR//intron       24981863 chr2:121548256-121548257(-) m6A 3'UTR//intron       24981863 chr2:121548269-121548270(-) m6A 3'UTR//intron       24981863 chr2:121548304-121548305(-) m6A 3'UTR//intron       24981863 chr2:121548371-121548372(-) m6A 3'UTR//intron       24981863 chr2:121548462-121548463(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr2:121548469-121548470(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr2:121548571-121548572(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr2:121548583-121548584(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr2:121548610-121548611(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr2:121548618-121548619(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr2:121548741-121548742(-) m6A CDS//intron       25456834//24981863//22608085 chr2:121548755-121548756(-) m6A CDS//intron       25456834//24981863//22608085 chr2:121548837-121548838(-) m6A CDS//intron       25683224//25456834//24981863//22608085 chr2:121548891-121548892(-) m6A 3'UTR//CDS       25683224//25456834//24981863//22608085 chr2:121549084-121549085(-) m6A 3'UTR//CDS//exon       25683224//25456834 chr2:121807036-121807037(-) m6A 5'UTR//exon       25456834

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Frmd5

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar