Basic Information:

  VIRBase ID:  

VHID00627421

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Alg12:  NM_145477     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Alg12
miRBase Accession/Entrez ID	MIMAT0005561	223774
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	ECM39

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Alg12	chr15:88637718(-) A-I      intronic chr15:88637717(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Alg12	chr15:88807287(-) A-I intron -    22524474 chr15:88807288(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Alg12	chr15:88805291-88805292(-) m6A 3'UTR//exon       25456834 chr15:88805401-88805402(-) m6A 3'UTR//exon       25683224//24981863 chr15:88805409-88805410(-) m6A 3'UTR//exon       25683224//24981863 chr15:88805425-88805426(-) m6A 3'UTR//exon       25683224//24981863 chr15:88805437-88805438(-) m6A 3'UTR//exon       25683224//24981863 chr15:88805466-88805467(-) m6A 3'UTR//exon       25683224 chr15:88805523-88805524(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr15:88805541-88805542(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr15:88805558-88805559(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr15:88805610-88805611(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr15:88805643-88805644(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr15:88805743-88805744(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr15:88805750-88805751(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr15:88805759-88805760(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr15:88805772-88805773(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr15:88805806-88805807(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr15:88805823-88805824(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr15:88805869-88805870(-) m6A CDS//exon       25683224//24981863//25569111//22608085 chr15:88805897-88805898(-) m6A CDS//exon       25683224//24981863//25569111//22608085 chr15:88805958-88805959(-) m6A CDS//exon       25569111 chr15:88806012-88806013(-) m6A CDS//exon       25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Alg12

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar