Basic Information:

  VIRBase ID:  

VHID00627314

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Zfp871:  NM_172458     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Zfp871
miRBase Accession/Entrez ID	MIMAT0005561	208292
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4732483N19//9030612M13Rik//AI118577//AI265322//mKIAA3006

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zfp871	chr17:32773025-32773026(-) m6A 3'UTR       25683224//24981863//22608085 chr17:32773034-32773035(-) m6A 3'UTR       25683224//24981863//22608085 chr17:32773041-32773042(-) m6A 3'UTR       25683224//24981863//22608085 chr17:32773319-32773320(-) m6A 3'UTR       25569111 chr17:32773402-32773403(-) m6A 3'UTR       25569111 chr17:32773560-32773561(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:32773565-32773566(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:32773640-32773641(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:32773657-32773658(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773738-32773739(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773753-32773754(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773772-32773773(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773782-32773783(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773823-32773824(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773847-32773848(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773884-32773885(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773894-32773895(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32773949-32773950(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:32774041-32774042(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:32774058-32774059(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:32774068-32774069(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:32774203-32774204(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:32774232-32774233(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32774255-32774256(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:32774282-32774283(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:32774393-32774394(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:32774406-32774407(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:32774468-32774469(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:32774506-32774507(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32774551-32774552(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32774561-32774562(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32774590-32774591(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32774647-32774648(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:32774786-32774787(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32774803-32774804(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32774813-32774814(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32774855-32774856(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32774870-32774871(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32774897-32774898(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32774926-32774927(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32775038-32775039(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32775067-32775068(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:32775208-32775209(-) m6A CDS//exon       24981863//25569111//22608085 chr17:32775275-32775276(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775290-32775291(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775346-32775347(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775375-32775376(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775391-32775392(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775403-32775404(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775430-32775431(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775458-32775459(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775487-32775488(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775643-32775644(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr17:32775672-32775673(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32775691-32775692(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32775729-32775730(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:32775830-32775831(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775885-32775886(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775915-32775916(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775921-32775922(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr17:32775989-32775990(-) m6A CDS//exon       25683224//24981863//25569111//22608085 chr17:32777161-32777162(-) m6A CDS//exon       25683224//24981863//25569111 chr17:32777174-32777175(-) m6A CDS//exon       25683224//24981863//25569111 chr17:32777414-32777415(-) m6A CDS//intron       25683224//24981863//25569111 chr17:32777424-32777425(-) m6A CDS//intron       25683224//24981863//25569111 chr17:32777450-32777451(-) m6A CDS//intron       25683224//24981863//25569111 chr17:32777495-32777496(-) m6A 5'UTR//CDS//intron       25683224//25569111 chr17:32787304-32787305(-) m6A 5'UTR//intron       25683224//25569111 chr17:32787330-32787331(-) m6A 5'UTR//intron       25683224//25569111 chr17:32787410-32787411(-) m6A 5'UTR//intron       25683224 chr17:32787437-32787438(-) m6A 5'UTR//intron       25683224 chr17:32788156-32788157(-) m6A 5'UTR//exon       25683224//24981863//25569111 chr17:32788164-32788165(-) m6A 5'UTR//exon       25683224//24981863//25569111 chr17:32788226-32788227(-) m6A 5'UTR//exon       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zfp871	Exosome Mast cells     17486113 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Zfp871

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar