Detail Information

Basic Information:


  VIRBase ID:  

VHID00627095

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:           Stard3nl:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-2-3p Stard3nl
miRBase
Accession/Entrez ID
MIMAT0005561 76205
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 0610035N01Rik//6530409L22Rik//AW124774//MENTHO

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Stard3nl
chr13:19357885-19357886(-) m6A 3'UTR//exon       24981863//26404942
chr13:19357997-19357998(-) m6A 3'UTR//exon       24981863
chr13:19365103-19365104(-) m6A 3'UTR//intron       25456834
chr13:19365178-19365179(-) m6A 3'UTR//intron       25456834//24981863
chr13:19365276-19365277(-) m6A CDS//intron       25456834
chr13:19376532-19376533(-) m6A CDS//exon       25569111//22608085
chr13:19376574-19376575(-) m6A CDS//exon       24981863//25569111//22608085
chr13:19376585-19376586(-) m6A CDS//exon       24981863//25569111//22608085
chr13:19376598-19376599(-) m6A CDS//exon       24981863//25569111//22608085
chr13:19376624-19376625(-) m6A 5'UTR//exon       24981863//25569111
chr13:19395752-19395753(-) m6A 5'UTR//exon       25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-2-3p
Interactor2: Stard3nl

Evidence Support:


Prediction-Evidence Rep
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