Basic Information:

  VIRBase ID:  

VHID00626997

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Fmnl2:  NM_172409     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Fmnl2
miRBase Accession/Entrez ID	MIMAT0005561	71409
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5430425K04Rik//m//Man

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fmnl2	chr2:52857923-52857924(+) m6A 5'UTR       25456834//25412662//24981863//25569111 chr2:52857988-52857989(+) m6A 5'UTR       25456834//25412662//24981863//25569111 chr2:52858164-52858165(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:52858175-52858176(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:52858231-52858232(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:53014812-53014813(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:53036522-53036523(+) m6A CDS       25412662//24981863//25569111 chr2:53036564-53036565(+) m6A CDS       25412662//22608085 chr2:53101497-53101498(+) Y CDS//exon       26075521 chr2:53103664-53103665(+) m6A CDS       25683224//25412662//22608085 chr2:53103711-53103712(+) m6A CDS       25683224//25412662//22608085 chr2:53103752-53103753(+) m6A CDS       25683224//25412662//22608085 chr2:53103795-53103796(+) m6A CDS       25683224//25412662//24981863 chr2:53105497-53105498(+) m6A CDS       25683224//25412662//24981863 chr2:53105531-53105532(+) m6A CDS       25683224//25412662//24981863 chr2:53105564-53105565(+) m6A CDS       25683224//25412662//24981863//25569111 chr2:53107429-53107430(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr2:53107459-53107460(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr2:53107468-53107469(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr2:53107475-53107476(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr2:53107506-53107507(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chr2:53107558-53107559(+) m6A CDS       25683224//24981863//25456834//25569111 chr2:53107609-53107610(+) m6A CDS       24981863//25569111 chr2:53107650-53107651(+) m6A CDS       24981863 chr2:53108262-53108263(+) m6A CDS       24981863 chr2:53114890-53114891(+) m6A CDS       25412662//22608085 chr2:53118382-53118383(+) m6A CDS       22608085 chr2:53118425-53118426(+) m6A CDS       22608085 chr2:53123516-53123517(+) m6A CDS       22608085 chr2:53126050-53126051(+) m6A CDS       24981863 chr2:53126068-53126069(+) m6A CDS       24981863 chr2:53126929-53126930(+) m6A CDS       24981863 chr2:53126964-53126965(+) m6A CDS       24981863 chr2:53128724-53128725(+) m6A CDS//intron       24981863 chr2:53131983-53131984(+) m6A 3'UTR       24981863 chr2:53132040-53132041(+) m6A 3'UTR       24981863 chr2:53132359-53132360(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Fmnl2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Fmnl2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar