Basic Information:

  VIRBase ID:  

VHID00626727

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Smad9:  NM_019483     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Smad9
miRBase Accession/Entrez ID	MIMAT0005561	55994
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Madh//MADH6//Madh8//Madh9//SMA//SMAD//Smad8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Smad9	chr3:54603397(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Smad9	chr3:54799475(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Smad9	chr3:54755690-54755691(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr3:54782218-54782219(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr3:54782269-54782270(+) m6A 5'UTR       25683224//25412662//24981863//25569111//22608085 chr3:54782475-54782476(+) m6A CDS       25683224//25412662//24981863//25569111 chr3:54782521-54782522(+) m6A CDS       25412662//24981863//25569111 chr3:54782658-54782659(+) m6A CDS       25412662 chr3:54786088-54786089(+) m6A CDS       25683224 chr3:54786154-54786155(+) m6A CDS       25683224//25412662 chr3:54797428-54797429(+) m6A CDS       24981863//25569111//22608085 chr3:54797529-54797530(+) m6A 3'UTR       24981863//25569111//22608085 chr3:54797732-54797733(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr3:54797756-54797757(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr3:54797816-54797817(+) m6A 3'UTR       25412662//24981863//25569111 chr3:54797889-54797890(+) m6A 3'UTR       24981863//25569111 chr3:54797922-54797923(+) m6A 3'UTR       24981863//25569111 chr3:54797939-54797940(+) m6A 3'UTR       24981863//25569111 chr3:54797962-54797963(+) m6A 3'UTR       24981863//25569111//22608085 chr3:54798034-54798035(+) m6A 3'UTR       24981863//25569111//22608085 chr3:54798055-54798056(+) m6A 3'UTR       24981863//25569111//22608085 chr3:54798090-54798091(+) m6A 3'UTR       24981863//25569111 chr3:54798331-54798332(+) m6A 3'UTR       24981863//22608085 chr3:54798356-54798357(+) m6A 3'UTR       24981863//22608085 chr3:54800131-54800132(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Smad9

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar