Basic Information:

  VIRBase ID:  

VHID00626625

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Oasl2:  NM_011854     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Oasl2
miRBase Accession/Entrez ID	MIMAT0005561	23962
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	M1204//Mmu-//Mmu-OASL//Oasl

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Oasl2	chr5:115361538(+) A-I      3'UTR chr5:115361587(+) A-I      3'UTR chr5:115361583(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Oasl2	chr5:114911578(+) A-I intron -    16940548 chr5:114911574(+) A-I intron -    16940548 chr5:114911529(+) A-I intron -    16940548

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Oasl2	chr5:114897645-114897646(+) m6A 5'UTR//exon       25412662//24981863 chr5:114897668-114897669(+) m6A CDS//exon       25412662//24981863 chr5:114897701-114897702(+) m6A CDS//exon       25412662//24981863 chr5:114897710-114897711(+) m6A CDS//exon       25412662//24981863 chr5:114897723-114897724(+) m6A CDS//exon       25412662//24981863 chr5:114897746-114897747(+) m6A CDS//exon       25412662//24981863 chr5:114897801-114897802(+) m6A CDS//exon       25412662//24981863 chr5:114897830-114897831(+) m6A CDS//exon       25412662//24981863 chr5:114897917-114897918(+) m6A exon//intron       25412662 chr5:114904488-114904489(+) m6A exon//intron       24981863 chr5:114904498-114904499(+) m6A exon//intron       24981863 chr5:114904520-114904521(+) m6A exon//intron       24981863 chr5:114905045-114905046(+) m6A 3'UTR//CDS//exon       25412662 chr5:114905058-114905059(+) m6A 3'UTR//CDS//exon       25412662 chr5:114905072-114905073(+) m6A 3'UTR//CDS//exon       25412662//24981863 chr5:114906676-114906677(+) m6A 3'UTR//CDS//exon       25412662//24981863 chr5:114906722-114906723(+) m6A 3'UTR//CDS//exon       25412662//24981863 chr5:114910919-114910920(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22575960 chr5:114910929-114910930(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22575960 chr5:114910941-114910942(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22575960 chr5:114910950-114910951(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr5:114911005-114911006(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr5:114911018-114911019(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:114911054-114911055(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22608085//22575960 chr5:114911076-114911077(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22608085//22575960 chr5:114911110-114911111(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22608085 chr5:114911127-114911128(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chr5:114911329-114911330(+) m6A 3'UTR//CDS       24981863//25412662 chr5:114911421-114911422(+) m6A 3'UTR       24981863 chr5:114911477-114911478(+) m6A 3'UTR       24981863 chr5:114911578-114911579(+) m6A 3'UTR       24981863 chr5:114911600-114911601(+) m6A 3'UTR       24981863 chr5:114911616-114911617(+) m6A 3'UTR       24981863 chr5:114911624-114911625(+) m6A 3'UTR       24981863 chr5:114911632-114911633(+) m6A 3'UTR       24981863 chr5:114911707-114911708(+) m6A 3'UTR       24981863 chr5:114911738-114911739(+) m6A 3'UTR       24981863 chr5:114911818-114911819(+) m6A 3'UTR       24981863 chr5:114911879-114911880(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:114911886-114911887(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:114911913-114911914(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:114911930-114911931(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:114911945-114911946(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:114911958-114911959(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:114911973-114911974(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:114912017-114912018(+) m6A 3'UTR       24981863//22608085 chr5:114912089-114912090(+) m6A 3'UTR       24981863 chr5:114912128-114912129(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Oasl2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar