Basic Information:

  VIRBase ID:  

VHID00626541

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          St8sia1:  NM_011374     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	St8sia1
miRBase Accession/Entrez ID	MIMAT0005561	20449
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9330109E03Rik//GD3//GD3S//Si//Sia-T//Siat8//Siat8a

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	St8sia1	chr6:142822009-142822010(-) Y 3'UTR//exon       26075521 chr6:142822419-142822420(-) m6A 3'UTR       25683224//22608085 chr6:142822429-142822430(-) m6A 3'UTR       25683224//22608085 chr6:142822602-142822603(-) m6A 3'UTR       25683224//22608085 chr6:142823354-142823355(-) m6A 3'UTR       25683224//22608085 chr6:142823402-142823403(-) m6A 3'UTR       25683224//22608085 chr6:142823424-142823425(-) m6A 3'UTR       25683224//22608085 chr6:142824840-142824841(-) m6A 3'UTR       25683224//22608085 chr6:142825417-142825418(-) m6A 3'UTR       25683224//22608085 chr6:142825691-142825692(-) m6A 3'UTR       25683224//22608085 chr6:142825710-142825711(-) m6A 3'UTR       25683224//22608085 chr6:142826277-142826278(-) m6A 3'UTR       25683224//22608085 chr6:142826346-142826347(-) m6A 3'UTR       25683224//22608085 chr6:142826358-142826359(-) m6A 3'UTR       25683224//22608085 chr6:142826495-142826496(-) m6A 3'UTR       25683224//22608085 chr6:142826504-142826505(-) m6A 3'UTR       25683224//22608085 chr6:142826775-142826776(-) m6A 3'UTR       24981863 chr6:142826806-142826807(-) m6A 3'UTR       24981863 chr6:142826822-142826823(-) m6A 3'UTR       24981863 chr6:142827233-142827234(-) m6A 3'UTR       25683224 chr6:142827429-142827430(-) m6A 3'UTR       25683224//22608085 chr6:142828138-142828139(-) m6A 3'UTR       - chr6:142828247-142828248(-) m6A 3'UTR       25683224//24981863//22608085 chr6:142828279-142828280(-) m6A 3'UTR       25683224//24981863//22608085 chr6:142828288-142828289(-) m6A 3'UTR       25683224//24981863//22608085 chr6:142828357-142828358(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828369-142828370(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828485-142828486(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828494-142828495(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828563-142828564(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828623-142828624(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828648-142828649(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828659-142828660(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828668-142828669(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828704-142828705(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828780-142828781(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:142828820-142828821(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr6:142828940-142828941(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:142828952-142828953(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:142829026-142829027(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:142829081-142829082(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:142829115-142829116(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//22608085 chr6:142829175-142829176(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//22608085 chr6:142829231-142829232(-) m6A 3'UTR//CDS//exon       25683224//24981863 chr6:142829261-142829262(-) m6A 3'UTR//CDS//exon       25683224//24981863 chr6:142867893-142867894(-) m6A 3'UTR//CDS//exon       25683224//24981863 chr6:142882883-142882884(-) m6A exon//intron       25683224 chr6:142914153-142914154(-) m6A 3'UTR//CDS       25683224 chr6:142914164-142914165(-) m6A 3'UTR//CDS       25683224 chr6:142963559-142963560(-) m6A CDS       25683224//22608085 chr6:142963781-142963782(-) m6A 5'UTR       25683224//24981863 chr6:142963969-142963970(-) m6A 5'UTR       25683224//24981863//22608085 chr6:142964012-142964013(-) m6A 5'UTR       25683224//24981863//25569111//22608085 chr6:142964046-142964047(-) m6A 5'UTR       25683224//24981863//25569111//22608085 chr6:142964111-142964112(-) m6A 5'UTR       25683224//24981863//25569111//22608085 chr6:142964156-142964157(-) m6A 5'UTR       24981863//22608085 chr6:142964263-142964264(-) m6A 5'UTR       24981863//22608085 chr6:142964382-142964383(-) m6A 5'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: St8sia1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar