Basic Information:

  VIRBase ID:  

VHID00626397

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Kcnc1:  NM_008421     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Kcnc1
miRBase Accession/Entrez ID	MIMAT0005561	16502
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C230009H10Rik//Kcr2-//Kcr2-1//KSh//KShIIIB//KV//Kv3.//Kv3.1//KV4//NGK//NGK2//Sh//Shaw

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Kcnc1	chr7:46397078-46397079(+) m6A 5'UTR       25683224//24981863 chr7:46397445-46397446(+) m6A 5'UTR       25683224//24981863 chr7:46397475-46397476(+) m6A 5'UTR       25683224//24981863 chr7:46397882-46397883(+) m6A CDS       25683224//24981863//22608085 chr7:46398035-46398036(+) m6A CDS       25683224//24981863//22608085 chr7:46398059-46398060(+) m6A CDS       25683224//24981863//22608085 chr7:46398178-46398179(+) Y CDS//exon       26075521 chr7:46398221-46398222(+) m6A CDS       25683224//24981863//22608085 chr7:46427405-46427406(+) m6A CDS//exon       25683224//24981863//22608085 chr7:46427433-46427434(+) m6A CDS//exon       25683224//24981863//22608085 chr7:46427438-46427439(+) m6A CDS//exon       25683224//24981863//22608085 chr7:46427601-46427602(+) m6A CDS//exon       25683224//24981863//22608085 chr7:46427914-46427915(+) m6A CDS       25683224//24981863//22608085 chr7:46427931-46427932(+) m6A CDS       25683224//24981863//22608085 chr7:46427988-46427989(+) m6A CDS       25683224//24981863//22608085 chr7:46428084-46428085(+) m6A CDS       25683224//24981863//22608085 chr7:46428127-46428128(+) m6A CDS       25683224//24981863//22608085 chr7:46428204-46428205(+) m6A CDS       25683224//24981863//22608085 chr7:46428286-46428287(+) m6A CDS//intron       25683224//24981863//22608085 chr7:46428356-46428357(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr7:46428421-46428422(+) m6A 3'UTR//intron       25683224//24981863 chr7:46428535-46428536(+) m6A 3'UTR//intron       25683224//24981863 chr7:46428558-46428559(+) m6A 3'UTR//intron       25683224//24981863 chr7:46428649-46428650(+) m6A 3'UTR//intron       25683224//24981863 chr7:46428675-46428676(+) m6A 3'UTR//intron       25683224//24981863 chr7:46428729-46428730(+) m6A 3'UTR//intron       25683224//24981863 chr7:46429124-46429125(+) m6A 3'UTR//intron       25683224//24981863 chr7:46429271-46429272(+) m6A 3'UTR//intron       25683224//24981863 chr7:46429330-46429331(+) m6A 3'UTR//intron       25683224//24981863 chr7:46429350-46429351(+) m6A 3'UTR//intron       25683224//24981863 chr7:46429402-46429403(+) m6A 3'UTR//intron       25683224//24981863 chr7:46429470-46429471(+) m6A 3'UTR//intron       25683224//24981863 chr7:46430726-46430727(+) m6A 3'UTR//intron       25683224//22608085 chr7:46430844-46430845(+) m6A 3'UTR//intron       25683224//22608085 chr7:46432046-46432047(+) m6A 3'UTR//intron       25683224//22608085 chr7:46432121-46432122(+) m6A 3'UTR//intron       25683224//22608085 chr7:46432269-46432270(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr7:46432372-46432373(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432382-46432383(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432416-46432417(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432704-46432705(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432720-46432721(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432767-46432768(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432773-46432774(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432829-46432830(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432865-46432866(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432885-46432886(+) m6A 3'UTR//intron       25683224//24981863 chr7:46432964-46432965(+) m6A 3'UTR//intron       25683224//24981863 chr7:46433038-46433039(+) m6A 3'UTR//intron       25683224//24981863 chr7:46433054-46433055(+) m6A 3'UTR//intron       25683224//24981863 chr7:46433273-46433274(+) m6A 3'UTR//intron       25683224//22608085 chr7:46433334-46433335(+) m6A 3'UTR//intron       25683224//24981863 chr7:46435164-46435165(+) m6A CDS       25683224//24981863 chr7:46435205-46435206(+) m6A CDS       25683224//24981863 chr7:46435220-46435221(+) m6A CDS       25683224//24981863 chr7:46435284-46435285(+) m6A CDS       25683224//24981863//22608085 chr7:46437355-46437356(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437384-46437385(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437409-46437410(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437621-46437622(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437639-46437640(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437761-46437762(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437783-46437784(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437832-46437833(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437874-46437875(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437955-46437956(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46437962-46437963(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46438054-46438055(+) m6A 3'UTR       25683224//24981863//22608085 chr7:46438060-46438061(+) m6A 3'UTR       25683224//24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Kcnc1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar