Detail Information

Basic Information:


  VIRBase ID:  

VHID00626306

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:           Eif4a2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-2-3p Eif4a2
miRBase
Accession/Entrez ID
MIMAT0005561 13682
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 4833432N07Rik//BM-010//Ddx2b//Eif//eIF-4A-II//Eif4//eIF4A-II

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Eif4a2
chr16:23107868-23107869(+) m6A exon//intron       25683224//22608085
chr16:23108973-23108974(+) Y intron       26075521
chr16:23110404-23110405(+) m6A exon//intron       22608085
chr16:23110503-23110504(+) m6A exon//intron       22608085
chr16:23110542-23110543(+) m6A exon//intron       25412662//22608085
chr16:23110547-23110548(+) m6A exon//intron       25412662//22608085
chr16:23110557-23110558(+) m6A exon//intron       25412662//22608085
chr16:23110695-23110696(+) m6A 3'UTR//CDS//exon       25412662//22608085
chr16:23111184-23111185(+) Y 3'UTR//CDS//exon       26075521
chr16:23111425-23111426(+) m6A exon//intron       25683224//22608085
chr16:23112430-23112431(+) m6A 3'UTR//intron       24981863
chr16:23113210-23113211(+) m6A 3'UTR//CDS       24981863//25569111
chr16:23113228-23113229(+) m6A 3'UTR//CDS       24981863//25569111
chr16:23113254-23113255(+) m6A 3'UTR//CDS       24981863//25569111
chr16:23113511-23113512(+) m6A 3'UTR       24981863//25569111
chr16:23113633-23113634(+) m6A 3'UTR       24981863//25569111
chr16:23113677-23113678(+) m6A 3'UTR       24981863//25569111
chr16:23113869-23113870(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-2-3p
Interactor2: Eif4a2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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