Basic Information:

  VIRBase ID:  

VHID00626215

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-3p:  MIMAT0005561          Rhoa:  NM_016802     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-3p	Rhoa
miRBase Accession/Entrez ID	MIMAT0005561	11848
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	A//Ar//Arha//Arha1//Arha2//R

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rhoa	chr9:108306285-108306286(+) m6A 5'UTR       25412662//25569111 chr9:108306496-108306497(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085//22575960 chr9:108306504-108306505(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085//22575960 chr9:108306532-108306533(+) m6A 5'UTR//exon       25412662//24981863//25569111//22608085//22575960 chr9:108335053-108335054(+) m6A CDS//exon       25412662//22608085 chr9:108335070-108335071(+) m6A CDS//exon       25412662//22608085 chr9:108335122-108335123(+) m6A CDS//exon       25412662//24981863//22608085 chr9:108335131-108335132(+) m6A CDS//exon       25412662//24981863//22608085 chr9:108336658-108336659(+) m6A CDS//exon       25412662//24981863//22608085 chr9:108336666-108336667(+) m1A CDS//exon       26863196 chr9:108336684-108336685(+) m6A CDS//exon       25412662//24981863//22608085 chr9:108336725-108336726(+) m6A CDS//exon       25412662//24981863//22608085 chr9:108337669-108337670(+) m6A 3'UTR       24981863//25569111 chr9:108337674-108337675(+) m6A 3'UTR       24981863//25569111 chr9:108337744-108337745(+) m6A 3'UTR       24981863//25569111//22608085 chr9:108337877-108337878(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rhoa	Dendrite Brain tissue     20035871

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-3p
Interactor2: Rhoa

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar