Basic Information:

  VIRBase ID:  

VHID00626177

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Zcchc17:  NM_153160     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Zcchc17
miRBase Accession/Entrez ID	MIMAT0005560	619605
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810055E05Rik//HSPC2//HSPC251//LDC4//pNO40//Ps//pS1D

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zcchc17	chr4:130315867-130315868(-) m6A 3'UTR       25569111 chr4:130315919-130315920(-) m6A 3'UTR       24981863//25569111 chr4:130315995-130315996(-) m6A 3'UTR       25456834//24981863//25569111 chr4:130316016-130316017(-) m6A 3'UTR       25456834//24981863//25569111 chr4:130316040-130316041(-) m6A 3'UTR       25456834//24981863//25569111 chr4:130316089-130316090(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:130316124-130316125(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:130316209-130316210(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:130316261-130316262(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:130316571-130316572(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:130316607-130316608(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:130316638-130316639(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:130316660-130316661(-) m1A CDS//exon       26863196 chr4:130316678-130316679(-) m1A CDS//exon       26863196 chr4:130316707-130316708(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:130316782-130316783(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:130316790-130316791(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:130318554-130318555(-) m6A exon//intron       25683224//25456834//25412662//24981863//25569111 chr4:130318586-130318587(-) m6A exon//intron       25683224//25412662//24981863 chr4:130318675-130318676(-) m6A exon//intron       24981863 chr4:130327240-130327241(-) m6A CDS//exon       25683224//25412662//24981863 chr4:130327299-130327300(-) m6A CDS//exon       25683224//25412662//24981863 chr4:130327322-130327323(-) m6A CDS//exon       25683224//25412662//24981863 chr4:130329602-130329603(-) m6A CDS//exon       25412662 chr4:130336939-130336940(-) m6A exon//intron       24981863//22608085 chr4:130337104-130337105(-) m6A CDS//exon       25683224//24981863//22608085 chr4:130337114-130337115(-) m6A CDS//exon       25683224//24981863//22608085 chr4:130338514-130338515(-) m6A CDS//exon       25683224//22608085 chr4:130338569-130338570(-) m6A CDS//exon       25683224//22608085 chr4:130344758-130344759(-) m6A exon//intron       25683224 chr4:130349305-130349306(-) m6A CDS       25683224 chr4:130352169-130352170(-) m6A exon//intron       25683224 chr4:130352180-130352181(-) m6A exon//intron       25683224 chr4:130354115-130354116(-) m6A exon//intron       25683224//24981863//25569111 chr4:130354169-130354170(-) m6A CDS//exon       25683224//24981863//25569111 chr4:130354179-130354180(-) m6A CDS//exon       25683224//24981863//25412662//25569111 chr4:130354210-130354211(-) m6A 5'UTR//exon       25683224//24981863//25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Zcchc17

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar