Basic Information:

  VIRBase ID:  

VHID00626173

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Arhgef15:  NM_177566     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Arhgef15
miRBase Accession/Entrez ID	MIMAT0005560	442801
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	D130071N09//D530030K12Rik//E5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arhgef15	chr11:68943181-68943182(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:68943249-68943250(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943288-68943289(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943335-68943336(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943365-68943366(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943389-68943390(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943438-68943439(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943463-68943464(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943500-68943501(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943576-68943577(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr11:68943679-68943680(-) m6A 3'UTR       24981863//25569111//22608085 chr11:68943718-68943719(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943828-68943829(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68943834-68943835(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:68944292-68944293(-) m6A 3'UTR       25456834//24981863//22608085 chr11:68944311-68944312(-) m6A 3'UTR       25456834//24981863//22608085 chr11:68944439-68944440(-) m6A 3'UTR       25683224//25456834//25569111 chr11:68944497-68944498(-) m6A 3'UTR       25683224//25456834//25569111 chr11:68944502-68944503(-) m6A 3'UTR       25683224//25456834//25569111 chr11:68944547-68944548(-) m6A 3'UTR//exon       25683224 chr11:68944713-68944714(-) m6A CDS//exon       25412662//22608085 chr11:68944767-68944768(-) m6A CDS//exon       25412662//22608085 chr11:68946307-68946308(-) m6A exon//intron       25412662//22608085 chr11:68946321-68946322(-) m6A exon//intron       25412662//22608085 chr11:68946565-68946566(-) m6A CDS//exon//intron       25683224//22608085 chr11:68946580-68946581(-) m6A CDS//exon//intron       25683224//22608085 chr11:68946637-68946638(-) m6A CDS//exon//intron       25683224//25569111//22608085 chr11:68947060-68947061(-) m6A CDS//exon       25683224//25569111//22608085 chr11:68947112-68947113(-) m6A CDS//exon       25569111//22608085 chr11:68951700-68951701(-) m6A CDS//exon       22608085 chr11:68951708-68951709(-) m6A CDS//exon       22608085 chr11:68954571-68954572(-) m6A CDS       25456834 chr11:68954639-68954640(-) m6A CDS       25456834 chr11:68954691-68954692(-) m6A CDS       25456834//25569111 chr11:68954759-68954760(-) m6A CDS       25456834//24981863//25569111//22575960 chr11:68954767-68954768(-) m6A CDS       25456834//24981863//25569111//22575960 chr11:68954777-68954778(-) m6A CDS       25456834//24981863//25569111//22575960

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Arhgef15

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar