Basic Information:

  VIRBase ID:  

VHID00626170

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Mn1:  NM_001081235     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Mn1
miRBase Accession/Entrez ID	MIMAT0005560	433938
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AA003644//AA009236

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mn1	chr5:111417388-111417389(+) m6A exon       25412662//25569111 chr5:111417411-111417412(+) m6A exon       25412662//25569111 chr5:111417425-111417426(+) m6A exon       25412662//25569111 chr5:111417465-111417466(+) m6A 5'UTR//exon       25412662//25569111 chr5:111417475-111417476(+) m6A 5'UTR//exon       25412662//25569111 chr5:111417694-111417695(+) m6A 5'UTR//intron       25456834//25412662//24981863//25569111 chr5:111417712-111417713(+) m6A 5'UTR//intron       25456834//25412662//24981863//25569111 chr5:111417752-111417753(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr5:111418059-111418060(+) m6A 5'UTR//exon       25456834//25412662//24981863//25569111 chr5:111418178-111418179(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111418229-111418230(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111418245-111418246(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111418310-111418311(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111418335-111418336(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111418355-111418356(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111418679-111418680(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:111418688-111418689(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:111418745-111418746(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111418835-111418836(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111418890-111418891(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111419229-111419230(+) m6A CDS       25412662//24981863//25569111 chr5:111419378-111419379(+) m6A CDS       25683224//24981863//25569111//22608085 chr5:111419534-111419535(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111419579-111419580(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111419642-111419643(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111419658-111419659(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111419684-111419685(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111419802-111419803(+) m6A CDS       25412662//24981863//25569111 chr5:111419819-111419820(+) m6A CDS       25412662//24981863//25569111 chr5:111419930-111419931(+) m6A CDS       25412662//24981863//25569111 chr5:111420282-111420283(+) m6A CDS       25683224//25412662//24981863//25569111//22575960 chr5:111420323-111420324(+) m6A CDS       25412662//24981863//25569111 chr5:111420560-111420561(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420611-111420612(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420665-111420666(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420687-111420688(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420757-111420758(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420777-111420778(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420796-111420797(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420825-111420826(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111420851-111420852(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111420956-111420957(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111420979-111420980(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111421010-111421011(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111421166-111421167(+) m6A CDS       25683224//25412662//24981863//25569111//22608085//22575960 chr5:111421175-111421176(+) m6A CDS       25683224//25412662//24981863//25569111//22608085//22575960 chr5:111421193-111421194(+) m6A CDS       25683224//25412662//24981863//25569111//22608085//22575960 chr5:111421356-111421357(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:111421386-111421387(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:111421476-111421477(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr5:111421510-111421511(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111421593-111421594(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111421616-111421617(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111421751-111421752(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111421767-111421768(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111421826-111421827(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111421865-111421866(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:111454767-111454768(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:111454847-111454848(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:111454995-111454996(+) m6A 3'UTR       24981863 chr5:111455020-111455021(+) m6A 3'UTR       24981863 chr5:111455088-111455089(+) m6A 3'UTR       24981863 chr5:111455107-111455108(+) m6A 3'UTR       24981863 chr5:111455372-111455373(+) m6A 3'UTR       25683224//24981863//25412662 chr5:111456310-111456311(+) m6A 3'UTR       25683224//22608085 chr5:111456635-111456636(+) m6A 3'UTR       25683224//24981863 chr5:111456688-111456689(+) m6A 3'UTR       25683224//24981863//26404942 chr5:111456716-111456717(+) m6A 3'UTR       25683224//24981863//26404942 chr5:111456785-111456786(+) m6A 3'UTR       25683224//24981863 chr5:111456813-111456814(+) m6A 3'UTR       25683224//24981863 chr5:111456840-111456841(+) m6A 3'UTR       25683224//24981863 chr5:111456866-111456867(+) m6A 3'UTR       25683224//24981863 chr5:111456891-111456892(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Mn1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar