Basic Information:

  VIRBase ID:  

VHID00626162

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Tnip3:  NM_001001495     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Tnip3
miRBase Accession/Entrez ID	MIMAT0005560	414084
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9030611K07Rik//ABIN-3//LIND

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tnip3	chr6:65590450-65590451(+) m6A 5'UTR//exon//intron       24981863 chr6:65590484-65590485(+) m6A 5'UTR//exon//intron       24981863 chr6:65593490-65593491(+) m6A CDS//exon       25412662 chr6:65593521-65593522(+) m6A CDS//exon       25412662 chr6:65593533-65593534(+) m6A CDS//exon       25412662 chr6:65593539-65593540(+) m6A CDS//exon       25412662 chr6:65593590-65593591(+) m6A exon//intron       25412662 chr6:65593659-65593660(+) m6A exon//intron       25412662 chr6:65596156-65596157(+) m6A CDS//exon       24981863 chr6:65597370-65597371(+) m6A CDS//exon       24981863 chr6:65597375-65597376(+) m6A CDS//exon       24981863 chr6:65597392-65597393(+) m6A CDS//exon       24981863 chr6:65597414-65597415(+) m6A CDS//exon       24981863 chr6:65597622-65597623(+) m6A exon//intron       24981863 chr6:65597640-65597641(+) m6A exon//intron       24981863 chr6:65597672-65597673(+) m6A exon//intron       24981863 chr6:65599822-65599823(+) m6A CDS//exon       24981863 chr6:65599879-65599880(+) m6A CDS//exon       24981863 chr6:65631096-65631097(+) m6A CDS       24981863 chr6:65631174-65631175(+) m6A 3'UTR       24981863 chr6:65631240-65631241(+) m6A 3'UTR       24981863 chr6:65631263-65631264(+) m6A 3'UTR       24981863 chr6:65631272-65631273(+) m6A 3'UTR       24981863 chr6:65631282-65631283(+) m6A 3'UTR       24981863 chr6:65631291-65631292(+) m6A 3'UTR       24981863 chr6:65631324-65631325(+) m6A 3'UTR       24981863 chr6:65631613-65631614(+) m6A 3'UTR       24981863 chr6:65631662-65631663(+) m6A 3'UTR       24981863 chr6:65631689-65631690(+) m6A 3'UTR       24981863 chr6:65631695-65631696(+) m6A 3'UTR       24981863 chr6:65631714-65631715(+) m6A 3'UTR       24981863 chr6:65631725-65631726(+) m6A 3'UTR       24981863 chr6:65631761-65631762(+) m6A 3'UTR       24981863 chr6:65631778-65631779(+) m6A 3'UTR       24981863 chr6:65631868-65631869(+) m6A 3'UTR       24981863 chr6:65631932-65631933(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Tnip3

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar