Basic Information:

  VIRBase ID:  

VHID00626070

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Fam171a1:  NM_001081161     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Fam171a1
miRBase Accession/Entrez ID	MIMAT0005560	269233
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	9630050M13Rik//AA409679

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam171a1	chr2:3114252-3114253(+) m6A 5'UTR       25412662 chr2:3118730-3118731(+) m6A 5'UTR//intron       25683224//22608085 chr2:3178413-3178414(+) m6A 5'UTR//CDS       25683224//22608085 chr2:3178430-3178431(+) m6A 5'UTR//CDS       25683224//22608085 chr2:3197393-3197394(+) m6A CDS       25683224//22608085 chr2:3197431-3197432(+) m6A CDS       25683224//22608085 chr2:3202547-3202548(+) m6A CDS       25683224//22608085 chr2:3202632-3202633(+) m6A CDS       25683224//25412662//22608085 chr2:3223487-3223488(+) m6A CDS//intron       25683224//22608085 chr2:3224832-3224833(+) m6A 3'UTR//CDS       25683224//24981863//25569111 chr2:3224998-3224999(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr2:3225056-3225057(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr2:3225154-3225155(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr2:3225184-3225185(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr2:3225197-3225198(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr2:3225257-3225258(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3225366-3225367(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085 chr2:3225381-3225382(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085 chr2:3225428-3225429(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3225435-3225436(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3225480-3225481(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr2:3225530-3225531(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr2:3225597-3225598(+) m6A 3'UTR//CDS       25683224//24981863//25569111//22608085 chr2:3225608-3225609(+) m6A 3'UTR//CDS       25683224//24981863//25569111//22608085 chr2:3225875-3225876(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3225915-3225916(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3225993-3225994(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3226052-3226053(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226074-3226075(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226103-3226104(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226208-3226209(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226214-3226215(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226259-3226260(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226333-3226334(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3226345-3226346(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:3226606-3226607(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226707-3226708(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226723-3226724(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226754-3226755(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226813-3226814(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:3226842-3226843(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:3226907-3226908(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:3227183-3227184(+) m6A 3'UTR       25683224//24981863 chr2:3227190-3227191(+) m6A 3'UTR       25683224//24981863 chr2:3227232-3227233(+) m6A 3'UTR       25683224//24981863 chr2:3227318-3227319(+) m6A 3'UTR       24981863//22608085 chr2:3227361-3227362(+) m6A 3'UTR       24981863//25569111//22608085 chr2:3227409-3227410(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr2:3227509-3227510(+) m6A 3'UTR       25683224//24981863//25569111 chr2:3227520-3227521(+) m6A 3'UTR       25683224//24981863//25569111 chr2:3227692-3227693(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Fam171a1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar