Detail Information

Basic Information:


  VIRBase ID:  

VHID00626061

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:           Ahsa2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-2-5p.1 Ahsa2
miRBase
Accession/Entrez ID		 MIMAT0005560 268390
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Ahsa2
chr11:23488312-23488313(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:23488387-23488388(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr11:23488475-23488476(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111
chr11:23488506-23488507(-) m6A 3'UTR       25683224//24981863//25569111
chr11:23488549-23488550(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:23488685-23488686(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr11:23488830-23488831(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:23488864-23488865(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:23488879-23488880(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr11:23488897-23488898(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr11:23488911-23488912(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr11:23488973-23488974(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr11:23488978-23488979(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr11:23489020-23489021(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr11:23489047-23489048(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr11:23489204-23489205(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085
chr11:23489233-23489234(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085
chr11:23489242-23489243(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085
chr11:23489254-23489255(-) m6A 3'UTR       24981863//25456834//25569111//26404942//22608085
chr11:23489271-23489272(-) m6A 3'UTR       24981863//25456834//25569111//26404942//22608085
chr11:23489401-23489402(-) m6A 3'UTR       24981863
chr11:23489418-23489419(-) m6A 3'UTR       24981863
chr11:23489525-23489526(-) m6A 3'UTR       24981863//26404942//22608085
chr11:23489538-23489539(-) m6A 3'UTR       24981863//26404942//22608085
chr11:23489585-23489586(-) m6A 3'UTR//exon       24981863//22608085
chr11:23489605-23489606(-) m6A 3'UTR//exon       24981863//22608085
chr11:23489773-23489774(-) m6A 3'UTR//intron       24981863//25569111
chr11:23489830-23489831(-) m6A 3'UTR//intron       25456834//24981863//25569111
chr11:23489896-23489897(-) m6A 3'UTR//intron       25456834//24981863//25569111//22575960
chr11:23489935-23489936(-) m6A 3'UTR//intron       25456834//24981863//25569111//22575960
chr11:23490355-23490356(-) m6A 3'UTR//exon//intron       25456834//24981863
chr11:23490375-23490376(-) m6A 3'UTR//exon//intron       25456834//24981863
chr11:23490506-23490507(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr11:23490550-23490551(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr11:23490679-23490680(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr11:23491015-23491016(-) m6A CDS//exon       24981863
chr11:23491037-23491038(-) m6A CDS//exon       24981863
chr11:23491497-23491498(-) Y CDS//exon       26075521
chr11:23492227-23492228(-) m6A CDS//exon       24981863//22608085
chr11:23492238-23492239(-) m6A CDS//exon       24981863//22608085
chr11:23492256-23492257(-) m6A CDS//exon       24981863//22608085
chr11:23493165-23493166(-) m6A CDS//intron       24981863//22608085
chr11:23493182-23493183(-) m6A CDS//intron       24981863//22608085
chr11:23493255-23493256(-) m6A CDS//intron       24981863
chr11:23497786-23497787(-) m6A 5'UTR//CDS       25412662//24981863//25569111
chr11:23497796-23497797(-) m6A 5'UTR//CDS       25412662//24981863//25569111
chr11:23497831-23497832(-) m6A 5'UTR//CDS       25412662//24981863//25569111
chr11:23497897-23497898(-) m6A 5'UTR       25412662//24981863//25569111
chr11:23497912-23497913(-) m6A 5'UTR       25412662//24981863//25569111
chr11:23497954-23497955(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Ahsa2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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