Basic Information:

  VIRBase ID:  

VHID00625924

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Fam160b1:  NM_145505     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Fam160b1
miRBase Accession/Entrez ID	MIMAT0005560	226252
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI450540//mKIAA1600

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam160b1	chr19:57361320-57361321(+) m6A 5'UTR       25569111 chr19:57378618-57378619(+) m6A CDS       25412662//22608085 chr19:57381824-57381825(+) Y CDS//exon       26075521 chr19:57386760-57386761(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr19:57386769-57386770(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr19:57386777-57386778(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr19:57386787-57386788(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr19:57386834-57386835(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr19:57386900-57386901(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr19:57387005-57387006(+) m6A 3'UTR       25683224//24981863//25456834//25569111 chr19:57387036-57387037(+) m6A 3'UTR       24981863//25456834//25569111 chr19:57388139-57388140(+) m6A 3'UTR       25683224 chr19:57388627-57388628(+) m6A 3'UTR       25569111 chr19:57388667-57388668(+) m6A 3'UTR       24981863//25569111 chr19:57388688-57388689(+) m6A 3'UTR       24981863//25569111 chr19:57388731-57388732(+) m6A 3'UTR       24981863//25569111 chr19:57388763-57388764(+) m6A 3'UTR       24981863 chr19:57389547-57389548(+) m6A 3'UTR       25569111 chr19:57389588-57389589(+) m6A 3'UTR       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Fam160b1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Fam160b1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar