Basic Information:

  VIRBase ID:  

VHID00625753

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Tmbim6:  NM_001171036     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Tmbim6
miRBase Accession/Entrez ID	MIMAT0005560	110213
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5031406P05Rik//Bi1//Tegt

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Tmbim6	chr15:99408620(+) C-U intron -    21258325

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmbim6	chr15:99392958-99392959(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22575960 chr15:99392981-99392982(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22575960 chr15:99393270-99393271(+) m6A 5'UTR//intron       25683224//25412662//24981863//25456834//25569111//26404942//22608085//22575960 chr15:99401503-99401504(+) m6A 5'UTR//intron       24981863 chr15:99401592-99401593(+) m6A 5'UTR       24981863//25569111//26404942 chr15:99404485-99404486(+) m6A CDS       25569111//22608085 chr15:99404499-99404500(+) m6A CDS       25569111//22608085 chr15:99404505-99404506(+) m6A CDS       25569111//22608085 chr15:99405729-99405730(+) m6A CDS       25569111//22608085 chr15:99405964-99405965(+) m6A exon//intron       25569111//22608085 chr15:99405971-99405972(+) m6A exon//intron       25569111//22608085 chr15:99408658-99408659(+) m6A 3'UTR//exon       25683224//24981863//25569111//22608085 chr15:99408754-99408755(+) m6A 3'UTR//exon       25683224//24981863//25412662//25569111//26404942 chr15:99408831-99408832(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22575960 chr15:99408874-99408875(+) m6A 3'UTR       25683224//25412662//24981863//25569111//22575960 chr15:99408924-99408925(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22608085//22575960 chr15:99409005-99409006(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22575960 chr15:99409045-99409046(+) m6A 3'UTR       25683224//24981863//25569111//22575960 chr15:99409231-99409232(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr15:99409268-99409269(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr15:99409308-99409309(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//26404942//22608085//22575960 chr15:99409616-99409617(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22608085 chr15:99409758-99409759(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942 chr15:99409788-99409789(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr15:99409839-99409840(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr15:99409860-99409861(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr15:99409970-99409971(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Tmbim6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar