Basic Information:

  VIRBase ID:  

VHID00625649

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Eml4:  NM_199466     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Eml4
miRBase Accession/Entrez ID	MIMAT0005560	78798
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4930443C24Rik//AI644019

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Eml4	chr17:83351120-83351121(+) m6A 5'UTR       25412662//24981863//25569111 chr17:83410064-83410065(+) m6A CDS       25569111//22608085 chr17:83421672-83421673(+) m6A CDS       25412662//24981863 chr17:83421712-83421713(+) m6A CDS       25412662//24981863 chr17:83425290-83425291(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr17:83425388-83425389(+) m6A CDS//intron       24981863//25569111 chr17:83425396-83425397(+) m6A CDS//intron       24981863//25569111 chr17:83427318-83427319(+) m6A CDS//intron       24981863 chr17:83427347-83427348(+) m6A CDS//intron       24981863 chr17:83428239-83428240(+) m6A CDS//intron       24981863 chr17:83440116-83440117(+) m6A CDS       25683224 chr17:83440121-83440122(+) m6A CDS       25683224 chr17:83440142-83440143(+) m6A CDS       25683224 chr17:83441315-83441316(+) m6A CDS       25683224//22608085 chr17:83441404-83441405(+) m6A CDS       25683224//22608085 chr17:83441432-83441433(+) m6A CDS       25683224//22608085 chr17:83444667-83444668(+) m6A CDS       25683224 chr17:83444684-83444685(+) m6A CDS       25683224 chr17:83446007-83446008(+) m6A CDS       25683224 chr17:83446014-83446015(+) m6A CDS       25683224 chr17:83450735-83450736(+) m6A CDS       22608085 chr17:83456996-83456997(+) m6A CDS       22608085 chr17:83457002-83457003(+) m6A CDS       22608085 chr17:83457013-83457014(+) m6A CDS       22608085 chr17:83461550-83461551(+) m6A CDS       22608085 chr17:83477882-83477883(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83477903-83477904(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83478006-83478007(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83478063-83478064(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:83478110-83478111(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:83478168-83478169(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:83478283-83478284(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:83478333-83478334(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:83478364-83478365(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:83478383-83478384(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:83478436-83478437(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:83478441-83478442(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:83478466-83478467(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:83478868-83478869(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:83478918-83478919(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:83478957-83478958(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:83478983-83478984(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr17:83479393-83479394(+) m6A 3'UTR       25569111 chr17:83479521-83479522(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr17:83479539-83479540(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr17:83479583-83479584(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83479599-83479600(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83479643-83479644(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83479919-83479920(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83479947-83479948(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83480005-83480006(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83480018-83480019(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr17:83480092-83480093(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:83480195-83480196(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr17:83480249-83480250(+) m6A 3'UTR       24981863 chr17:83480267-83480268(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Eml4	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Eml4

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar