Basic Information:

  VIRBase ID:  

VHID00625624

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Snx27:  NM_001082484     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Snx27
miRBase Accession/Entrez ID	MIMAT0005560	76742
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5730552M22Rik//D13Mgi2//ESTM4//ESTM45//ESTM47//R75405

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Snx27	chr3:94500901-94500902(-) m6A 3'UTR       24981863//26404942 chr3:94500907-94500908(-) m6A 3'UTR       24981863//26404942 chr3:94500932-94500933(-) m6A 3'UTR       24981863//26404942 chr3:94500997-94500998(-) m6A 3'UTR       24981863//25569111 chr3:94501048-94501049(-) m6A 3'UTR//exon       24981863//25569111 chr3:94501157-94501158(-) m6A 3'UTR//exon       24981863 chr3:94501903-94501904(-) m6A 3'UTR//intron       24981863 chr3:94501943-94501944(-) m6A 3'UTR//intron       24981863//25569111 chr3:94502025-94502026(-) m6A 3'UTR//intron       25683224//24981863//25569111 chr3:94502049-94502050(-) m6A 3'UTR//intron       24981863//25569111 chr3:94502940-94502941(-) m6A 3'UTR//CDS//exon//intron       24981863 chr3:94503491-94503492(-) m6A 3'UTR//CDS//exon//intron       25412662//24981863//22608085 chr3:94503527-94503528(-) m6A 3'UTR//CDS//exon//intron       25412662//24981863//22608085 chr3:94503589-94503590(-) m6A 3'UTR//CDS//exon//intron       25412662//22608085 chr3:94561955-94561956(-) m6A 3'UTR//CDS       25412662//22608085 chr3:94562026-94562027(-) m6A CDS//intron       25412662 chr3:94582259-94582260(-) m6A CDS//intron       25412662 chr3:94582568-94582569(-) m6A 5'UTR       25412662

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Snx27

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar