Basic Information:

  VIRBase ID:  

VHID00625508

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Sash1:  NM_175155     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Sash1
miRBase Accession/Entrez ID	MIMAT0005560	70097
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	1100001C18Rik//2500002E12Rik//A330076K04Rik//mKIAA0790

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sash1	chr10:8724691-8724692(-) m6A 3'UTR       25683224//22608085 chr10:8724722-8724723(-) m6A 3'UTR       25683224//22608085 chr10:8724857-8724858(-) m6A 3'UTR       25456834//24981863//22608085 chr10:8724926-8724927(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr10:8724974-8724975(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:8725013-8725014(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr10:8725084-8725085(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr10:8725224-8725225(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8725233-8725234(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8725273-8725274(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8725358-8725359(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8725365-8725366(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8725379-8725380(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8725471-8725472(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8725523-8725524(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8725532-8725533(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8725550-8725551(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr10:8725562-8725563(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr10:8727900-8727901(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr10:8727939-8727940(-) m6A CDS       25683224//25412662//24981863//25569111 chr10:8729379-8729380(-) m6A CDS       25683224//25412662//24981863//25569111 chr10:8729400-8729401(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8729447-8729448(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8729507-8729508(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8729536-8729537(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8729555-8729556(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8729725-8729726(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8729731-8729732(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8729792-8729793(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8729834-8729835(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8729921-8729922(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8729935-8729936(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8730070-8730071(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr10:8730178-8730179(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:8730219-8730220(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8730267-8730268(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:8730422-8730423(-) m6A CDS       25456834//25412662//24981863//25569111 chr10:8730430-8730431(-) m6A CDS       25456834//25412662//24981863//25569111 chr10:8733606-8733607(-) m6A CDS       25412662//25569111 chr10:8733633-8733634(-) m6A CDS       25412662//25569111 chr10:8733666-8733667(-) m6A CDS       25412662 chr10:8739369-8739370(-) m6A CDS       25683224//22608085 chr10:8739376-8739377(-) m6A CDS       25683224//22608085 chr10:8739400-8739401(-) m6A CDS       25683224//25412662//22608085 chr10:8739417-8739418(-) m6A CDS       25683224//25412662//22608085 chr10:8739427-8739428(-) m6A CDS       25683224//25412662//22608085 chr10:8739433-8739434(-) m6A CDS       25683224//25412662//22608085 chr10:8739468-8739469(-) m6A CDS       25683224//25412662//25569111//22608085 chr10:8740189-8740190(-) m6A CDS       25683224//25412662//25569111//22608085 chr10:8740224-8740225(-) m6A CDS       25683224//25412662//25569111//22608085 chr10:8740321-8740322(-) m6A CDS       25683224//22608085 chr10:8740353-8740354(-) m6A CDS       25683224//22608085 chr10:8741443-8741444(-) m6A CDS       25683224//22608085 chr10:8741588-8741589(-) m6A CDS       25683224//25412662//22608085 chr10:8742498-8742499(-) m6A CDS       25683224//25412662//22608085 chr10:8742506-8742507(-) m6A CDS       25683224//25412662//22608085 chr10:8744537-8744538(-) m6A CDS       25683224//25412662//22608085 chr10:8750758-8750759(-) m6A CDS//intron       25683224//24981863 chr10:8750788-8750789(-) m6A CDS//intron       25412662//24981863 chr10:8750818-8750819(-) m6A CDS//intron       25412662 chr10:8756668-8756669(-) m6A CDS       25683224//22608085 chr10:8756693-8756694(-) m6A CDS       25683224//22608085 chr10:8756729-8756730(-) m6A CDS       25683224 chr10:8756736-8756737(-) m6A CDS       25683224 chr10:8762126-8762127(-) m6A 5'UTR//intron       25683224 chr10:8762223-8762224(-) m6A 5'UTR//intron       25683224//25412662 chr10:8780567-8780568(-) m6A CDS       25412662 chr10:8780576-8780577(-) m6A CDS       25412662 chr10:8786360-8786361(-) m6A CDS       25683224//24981863//22608085 chr10:8786379-8786380(-) m6A CDS       25683224//24981863//22608085 chr10:8814451-8814452(-) m6A CDS//exon       25683224//25412662//22608085 chr10:8850372-8850373(-) m6A CDS//exon       25683224//25412662//22608085 chr10:8850474-8850475(-) m6A CDS//exon       25683224//25412662//22608085 chr10:8885743-8885744(-) m6A CDS//exon       25683224//25412662//22608085 chr10:8885887-8885888(-) m6A 5'UTR//exon       25412662//24981863//25569111 chr10:8885938-8885939(-) m6A 5'UTR//exon       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Sash1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar