Detail Information

Basic Information:


  VIRBase ID:  

VHID00625413

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:           Fbxo25:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-2-5p.1 Fbxo25
miRBase
Accession/Entrez ID
MIMAT0005560 66822
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 9130015I06Rik//AI649137//Fbx25

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Fbxo25
chr8:13907855-13907856(+) m6A 5'UTR       24981863//25569111
chr8:13914969-13914970(+) m6A CDS       24981863//25569111
chr8:13915001-13915002(+) m6A CDS       24981863//25569111
chr8:13921019-13921020(+) m6A CDS       24981863//22608085
chr8:13939796-13939797(+) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085
chr8:13939853-13939854(+) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085
chr8:13939976-13939977(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085
chr8:13939986-13939987(+) m6A 3'UTR       25456834//24981863//26404942//22608085
chr8:13940019-13940020(+) m6A 3'UTR       25456834//24981863//26404942//22608085
chr8:13940053-13940054(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr8:13940058-13940059(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr8:13940155-13940156(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr8:13940192-13940193(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr8:13940241-13940242(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr8:13940271-13940272(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr8:13940291-13940292(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr8:13940323-13940324(+) m6A 3'UTR       25456834//24981863//25412662//25569111//26404942//22608085

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Fbxo25

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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