Basic Information:

  VIRBase ID:  

VHID00625347

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Dhodh:  NM_020046     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Dhodh
miRBase Accession/Entrez ID	MIMAT0005560	56749
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2810417D19Rik//AI834883

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Dhodh	chr8:109593391-109593392(-) m6A 3'UTR//exon       25412662//24981863 chr8:109593797-109593798(-) m6A 3'UTR//intron       24981863 chr8:109593962-109593963(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr8:109593978-109593979(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr8:109594828-109594829(-) m6A exon//intron       25412662 chr8:109595054-109595055(-) m6A 3'UTR//CDS//exon//intron       25412662//22608085 chr8:109595668-109595669(-) m6A 3'UTR//CDS//exon       25412662//22608085 chr8:109595677-109595678(-) m6A 3'UTR//CDS//exon       25412662//22608085 chr8:109595730-109595731(-) m6A 3'UTR//CDS//exon       25412662//22608085 chr8:109596055-109596056(-) m6A 3'UTR//CDS//exon       25412662//22608085 chr8:109596150-109596151(-) Y 3'UTR//CDS//exon       26075521 chr8:109606220-109606221(-) m6A CDS//exon       25569111 chr8:109606300-109606301(-) m6A CDS//exon       25412662//24981863//25569111 chr8:109606378-109606379(-) m6A 5'UTR//CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr8:109608360-109608361(-) m6A CDS//exon//intron       25683224//25412662//24981863//25456834//25569111//22608085 chr8:109608545-109608546(-) m6A 5'UTR       25412662 chr8:109608634-109608635(-) m6A 5'UTR       25412662//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Dhodh	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Dhodh

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar