Basic Information:

  VIRBase ID:  

VHID00625265

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Abcf3:  NM_013852     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Abcf3
miRBase Accession/Entrez ID	MIMAT0005560	27406
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI326318//AU016058//BB119416

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Abcf3	chr16:20548670-20548671(+) m6A 5'UTR       24981863//25569111//22608085 chr16:20549029-20549030(+) m6A CDS       24981863//25569111 chr16:20549052-20549053(+) m6A CDS       25569111 chr16:20549240-20549241(+) m6A CDS       - chr16:20549743-20549744(+) m6A CDS//exon       24981863//25412662//22608085 chr16:20549756-20549757(+) m6A CDS//exon       25412662//24981863//22608085 chr16:20549765-20549766(+) m6A CDS//exon       25412662//24981863//22608085 chr16:20549780-20549781(+) m6A CDS//exon       25412662//24981863//22608085 chr16:20550020-20550021(+) m6A CDS//exon       25412662//24981863//22608085 chr16:20550078-20550079(+) m6A CDS//exon       25412662//24981863//22608085 chr16:20550087-20550088(+) m6A CDS//exon       25412662//24981863//22608085 chr16:20550272-20550273(+) m6A CDS//exon       25683224//25412662//22608085 chr16:20550299-20550300(+) m6A CDS//exon       25683224//25412662//22608085 chr16:20550446-20550447(+) m6A CDS//exon       25683224//22608085 chr16:20560487-20560488(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr16:20560533-20560534(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:20560551-20560552(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:20560606-20560607(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:20560623-20560624(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:20560687-20560688(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr16:20560708-20560709(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Abcf3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar