Basic Information:

  VIRBase ID:  

VHID00625193

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Syngr1:  NM_009303     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Syngr1
miRBase Accession/Entrez ID	MIMAT0005560	20972
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	p2//p29//R75468//Syng//Syngr1b

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Syngr1	chr15:80110642-80110643(+) m6A CDS       25569111//22608085 chr15:80111670-80111671(+) m6A CDS       25569111//22608085 chr15:80113268-80113269(+) m6A 3'UTR//intron       24981863//25412662 chr15:80113322-80113323(+) m6A 3'UTR//intron       25412662 chr15:80115921-80115922(+) m6A CDS       25683224//24981863//22608085 chr15:80115930-80115931(+) m6A CDS       25683224//24981863//22608085 chr15:80115942-80115943(+) m6A CDS       25683224//24981863//22608085 chr15:80115990-80115991(+) m6A CDS       25683224//24981863//22608085 chr15:80117418-80117419(+) m6A 3'UTR       24981863//22608085 chr15:80117466-80117467(+) m6A 3'UTR       24981863//22608085 chr15:80117497-80117498(+) m6A 3'UTR       24981863//22608085 chr15:80118153-80118154(+) m6A 3'UTR       26404942//22608085 chr15:80118171-80118172(+) m6A 3'UTR       26404942//22608085 chr15:80118261-80118262(+) m6A 3'UTR       24981863//22608085 chr15:80118271-80118272(+) m6A 3'UTR       24981863//22608085 chr15:80118294-80118295(+) m6A 3'UTR       24981863//22608085 chr15:80118344-80118345(+) m6A 3'UTR       24981863//22608085 chr15:80118374-80118375(+) m6A 3'UTR       24981863//22608085 chr15:80119391-80119392(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Syngr1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar