Basic Information:

  VIRBase ID:  

VHID00625105

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Inpp5k:  NM_008916     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Inpp5k
miRBase Accession/Entrez ID	MIMAT0005560	19062
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	C62//Pps//SKIP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Inpp5k	chr11:75455717(+) A-I      intronic chr11:75459721(+) A-I      intronic chr11:75455703(+) A-I      intronic chr11:75455697(+) A-I      intronic chr11:75455720(+) A-I      intronic chr11:75455729(+) A-I      intronic chr11:75459711(+) A-I      intronic chr11:75457230(+) A-I      intronic chr11:75459702(+) A-I      intronic chr11:75459733(+) A-I      intronic chr11:75455710(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Inpp5k	chr11:75642195(+) A-I intron -    22524474 chr11:75642201(+) A-I intron -    22524474 chr11:75642208(+) A-I intron -    22524474 chr11:75642215(+) A-I intron -    22524474 chr11:75642218(+) A-I intron -    22524474 chr11:75642227(+) A-I intron -    22524474 chr11:75643728(+) A-I intron -    22524474 chr11:75646200(+) A-I intron -    22524474 chr11:75646209(+) A-I intron -    22524474 chr11:75646219(+) A-I intron -    22524474 chr11:75646231(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Inpp5k	chr11:75631037-75631038(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr11:75631065-75631066(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr11:75631072-75631073(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr11:75631112-75631113(+) m6A CDS//exon       25412662//24981863//25569111 chr11:75631118-75631119(+) m6A CDS//exon       25412662//24981863//25569111 chr11:75637578-75637579(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr11:75637603-75637604(+) m6A exon//intron       25683224//25456834//25412662//24981863//25569111 chr11:75637779-75637780(+) m6A exon//intron       25456834//24981863 chr11:75637786-75637787(+) m6A exon//intron       25456834//24981863 chr11:75637796-75637797(+) m6A exon//intron       25456834 chr11:75637811-75637812(+) m6A exon//intron       25456834 chr11:75637937-75637938(+) m6A exon//intron       25569111//22608085 chr11:75637958-75637959(+) m6A exon//intron       25569111//22608085 chr11:75637971-75637972(+) m6A exon//intron       25569111//22608085 chr11:75638109-75638110(+) m6A exon//intron       25456834//25412662//24981863//25569111 chr11:75638164-75638165(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111 chr11:75638170-75638171(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111 chr11:75638185-75638186(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111 chr11:75639436-75639437(+) m6A exon//intron       24981863 chr11:75645452-75645453(+) m6A 3'UTR//CDS//exon       24981863 chr11:75645549-75645550(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr11:75646789-75646790(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr11:75646829-75646830(+) m6A 3'UTR//CDS//exon       24981863//25569111//22608085 chr11:75646839-75646840(+) m6A 3'UTR//CDS//exon       24981863//25569111//22608085 chr11:75646903-75646904(+) m6A 3'UTR//CDS//exon       24981863//25569111//22608085 chr11:75646913-75646914(+) m6A 3'UTR//CDS//exon       24981863//25569111//22608085 chr11:75647271-75647272(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr11:75647679-75647680(+) m6A 3'UTR//CDS//exon       25412662 chr11:75647861-75647862(+) m6A 3'UTR//exon       25412662//24981863//25569111 chr11:75647889-75647890(+) m6A 3'UTR//exon       24981863//25569111 chr11:75647933-75647934(+) m6A 3'UTR//exon       24981863 chr11:75647958-75647959(+) m6A 3'UTR//exon       24981863 chr11:75647984-75647985(+) m6A 3'UTR//exon       24981863 chr11:75648045-75648046(+) m6A 3'UTR//exon       24981863 chr11:75648191-75648192(+) m6A 3'UTR//exon       25412662//24981863//25569111 chr11:75648251-75648252(+) m6A 3'UTR//exon       25412662//24981863//25569111 chr11:75648409-75648410(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr11:75648516-75648517(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:75648542-75648543(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:75648554-75648555(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:75648566-75648567(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:75648670-75648671(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Inpp5k

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar