Basic Information:

  VIRBase ID:  

VHID00624980

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Nr4a1:  NM_010444     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Nr4a1
miRBase Accession/Entrez ID	MIMAT0005560	15370
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	Gf//GFR//Gfrp//GFRP1//Hbr//Hbr-//Hbr-1//Hbr1//Hm//Hmr//N1//N10//NGFI//NGFI-B//NGFIB//NP//NP10//Nur//nur77//NUR77-1//NUR77-2//TI//TIS1//TR//TR3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Nr4a1	chr15:101099658(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Nr4a1	chr15:101269227(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nr4a1	chr15:101266893-101266894(+) m6A 5'UTR       25412662//24981863//25569111 chr15:101266917-101266918(+) m6A 5'UTR       25412662//24981863//25569111 chr15:101270111-101270112(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:101270131-101270132(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:101270190-101270191(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:101270207-101270208(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:101270403-101270404(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr15:101270456-101270457(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960 chr15:101270585-101270586(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101270609-101270610(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101270808-101270809(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr15:101271775-101271776(+) m6A CDS       25683224//25412662//22608085 chr15:101271793-101271794(+) m6A CDS       25683224//25412662//22608085 chr15:101271808-101271809(+) m6A CDS       25683224//25412662//22608085 chr15:101272160-101272161(+) m6A CDS       25683224//25412662 chr15:101272201-101272202(+) m6A CDS       25412662 chr15:101272266-101272267(+) m6A CDS       25412662 chr15:101272293-101272294(+) m6A CDS       25412662 chr15:101272725-101272726(+) m6A CDS       25412662 chr15:101272859-101272860(+) m6A CDS       25412662 chr15:101272865-101272866(+) m6A CDS       25412662 chr15:101272893-101272894(+) m6A CDS       25412662 chr15:101273020-101273021(+) m6A CDS       25412662 chr15:101274013-101274014(+) m6A CDS       25683224//25412662//22608085 chr15:101274088-101274089(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:101274128-101274129(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274144-101274145(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274193-101274194(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:101274220-101274221(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:101274235-101274236(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274264-101274265(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274328-101274329(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274336-101274337(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274369-101274370(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274399-101274400(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274406-101274407(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274413-101274414(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:101274506-101274507(+) m6A 3'UTR       25683224//25456834//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Nr4a1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar