Basic Information:

  VIRBase ID:  

VHID00624856

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-2-5p.1:  MIMAT0005560          Atp8a1:  NM_009727     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-2-5p.1	Atp8a1
miRBase Accession/Entrez ID	MIMAT0005560	11980
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	AI481521//AI853962//APLT//Atp//Atp3a2//AW743152//AW822227//B230107D19Rik//ClassI

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Atp8a1	chr5:67618909-67618910(-) Y 3'UTR//exon       26075521 chr5:67618988-67618989(-) Y 3'UTR//exon       26075521 chr5:67619743-67619744(-) m6A 3'UTR       26404942//22608085 chr5:67619809-67619810(-) m6A 3'UTR       26404942//22608085 chr5:67619984-67619985(-) m6A 3'UTR       24981863//22608085 chr5:67620093-67620094(-) m6A 3'UTR       24981863//22608085 chr5:67620245-67620246(-) m6A 3'UTR       24981863 chr5:67620272-67620273(-) m6A 3'UTR       24981863 chr5:67620285-67620286(-) m6A 3'UTR       24981863 chr5:67620311-67620312(-) m6A 3'UTR       24981863//26404942 chr5:67620392-67620393(-) m6A 3'UTR       24981863//26404942 chr5:67620441-67620442(-) m6A 3'UTR       24981863//26404942 chr5:67620529-67620530(-) m6A 3'UTR       24981863 chr5:67620705-67620706(-) m6A 3'UTR       24981863//22608085 chr5:67620739-67620740(-) m6A 3'UTR       24981863//22608085 chr5:67622139-67622140(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr5:67622166-67622167(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr5:67622190-67622191(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr5:67622205-67622206(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr5:67622236-67622237(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr5:67622322-67622323(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr5:67622447-67622448(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr5:67622551-67622552(-) m6A 3'UTR       24981863//25569111//22608085 chr5:67622619-67622620(-) m6A 3'UTR//CDS       24981863//22608085 chr5:67847419-67847420(-) m6A 5'UTR//exon       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Atp8a1	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-2-5p.1
Interactor2: Atp8a1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar