Detail Information

Basic Information:


  VIRBase ID:  

VHID00624015

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:           Zfp980:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-1-3p Zfp980
miRBase
Accession/Entrez ID
MIMAT0005558 100041379
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - Gm13242

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Zfp980
chr4:145672803-145672804(+) m6A 5'UTR       25569111
chr4:145690279-145690280(+) m6A intron       25683224
chr4:145690327-145690328(+) m6A intron       25683224
chr4:145696154-145696155(+) m6A 5'UTR       25569111
chr4:145700950-145700951(+) m6A CDS       25456834
chr4:145700955-145700956(+) m6A CDS       25456834
chr4:145701096-145701097(+) m6A CDS       25456834
chr4:145701106-145701107(+) m6A CDS       25456834
chr4:145701113-145701114(+) m6A CDS       25456834
chr4:145701119-145701120(+) m6A CDS       25456834
chr4:145701147-145701148(+) m6A CDS       25456834
chr4:145701156-145701157(+) m6A CDS       25456834
chr4:145701197-145701198(+) m6A CDS       25456834
chr4:145702120-145702121(+) m6A CDS       -
chr4:145704109-145704110(+) m6A 3'UTR       25456834
chr4:145704152-145704153(+) m6A 3'UTR       25456834
chr4:145704225-145704226(+) m6A 3'UTR       25456834
chr4:145704239-145704240(+) m6A 3'UTR       25456834

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-1-3p
Interactor2: Zfp980

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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