Basic Information:

  VIRBase ID:  

VHID00623930

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Gse1:  NM_198671     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Gse1
miRBase Accession/Entrez ID	MIMAT0005558	382034
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2210013I18Rik//mKIAA0182

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gse1	chr8:120228609-120228610(+) m6A 5'UTR       25412662//25569111 chr8:120228638-120228639(+) m6A 5'UTR       25412662//25569111 chr8:120228682-120228683(+) m6A 5'UTR       25412662 chr8:120229063-120229064(+) m6A CDS       25412662//24981863//25569111 chr8:120229141-120229142(+) m6A CDS       25412662//24981863//25569111 chr8:120229202-120229203(+) m6A CDS       25412662//25569111 chr8:120229361-120229362(+) m6A CDS       25412662//25569111 chr8:120229516-120229517(+) m6A CDS       25412662//25569111 chr8:120229599-120229600(+) m6A CDS       25412662//24981863//25569111 chr8:120229786-120229787(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120229823-120229824(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120229894-120229895(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:120230158-120230159(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:120230174-120230175(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:120230266-120230267(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:120230294-120230295(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:120230350-120230351(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:120230473-120230474(+) m6A CDS       25412662//25569111 chr8:120230640-120230641(+) m6A CDS       25683224//25412662//25569111 chr8:120230678-120230679(+) m6A CDS       25683224//25412662//25569111 chr8:120354071-120354072(+) m6A CDS       25412662//25569111 chr8:120354094-120354095(+) m6A CDS       25412662//25569111 chr8:120354140-120354141(+) m6A CDS       25412662//25569111 chr8:120354164-120354165(+) m6A CDS       25412662//25569111 chr8:120488460-120488461(+) m6A 5'UTR//intron       25412662 chr8:120488472-120488473(+) m6A 5'UTR//intron       25412662 chr8:120488619-120488620(+) m6A 5'UTR//intron       24981863 chr8:120488862-120488863(+) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr8:120488924-120488925(+) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr8:120488930-120488931(+) m6A 5'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr8:120488990-120488991(+) m6A 5'UTR//intron       25683224//25456834//24981863//25569111 chr8:120489122-120489123(+) m6A CDS//intron       24981863//25569111 chr8:120535939-120535940(+) m6A 5'UTR//intron       24981863 chr8:120537493-120537494(+) m6A 5'UTR//intron       25683224//25412662//24981863//25569111 chr8:120537497-120537498(+) m6A 5'UTR//intron       25412662//25569111 chr8:120553639-120553640(+) m6A CDS       25412662//24981863 chr8:120553782-120553783(+) m6A CDS       25412662//24981863 chr8:120562789-120562790(+) m6A CDS//exon       25683224//24981863 chr8:120563780-120563781(+) m6A exon//intron       25412662 chr8:120563828-120563829(+) m6A exon//intron       25412662 chr8:120566518-120566519(+) m6A CDS       25683224//25412662 chr8:120566976-120566977(+) m6A CDS       25683224//25412662 chr8:120567015-120567016(+) m6A CDS       25683224//25412662//24981863 chr8:120567051-120567052(+) m6A CDS       25683224//25412662//24981863 chr8:120568178-120568179(+) m6A CDS       25683224//25412662//24981863 chr8:120568418-120568419(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr8:120569267-120569268(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:120569321-120569322(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:120570723-120570724(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr8:120570752-120570753(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr8:120570832-120570833(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120570850-120570851(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120571012-120571013(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:120571074-120571075(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:120571088-120571089(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:120571109-120571110(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:120571128-120571129(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:120571199-120571200(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:120571295-120571296(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120571300-120571301(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120572397-120572398(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120572402-120572403(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120572688-120572689(+) m6A CDS//exon       25683224//25412662 chr8:120572825-120572826(+) m6A CDS//exon       25412662 chr8:120573058-120573059(+) m6A exon//intron       25456834//25412662//25569111 chr8:120573076-120573077(+) m6A exon//intron       25456834//25412662//25569111 chr8:120573095-120573096(+) m6A exon//intron       25456834//25412662//25569111 chr8:120573140-120573141(+) m6A exon//intron       25456834//25412662//24981863//25569111 chr8:120573152-120573153(+) m6A exon//intron       25456834//25412662//24981863//25569111 chr8:120574230-120574231(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr8:120574242-120574243(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr8:120574254-120574255(+) m6A CDS//intron       25683224//25412662//25569111 chr8:120575010-120575011(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120575019-120575020(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120575027-120575028(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120575033-120575034(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120575170-120575171(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:120576278-120576279(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:120576387-120576388(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120576437-120576438(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120576443-120576444(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120576455-120576456(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120576467-120576468(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120576543-120576544(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr8:120577976-120577977(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:120578027-120578028(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:120578485-120578486(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:120578529-120578530(+) m6A CDS       25683224//25412662//24981863//25569111 chr8:120578626-120578627(+) m6A 3'UTR       25683224//24981863//25569111 chr8:120578727-120578728(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr8:120578799-120578800(+) m6A 3'UTR       25683224//25412662//24981863//25569111 chr8:120578991-120578992(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr8:120579120-120579121(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr8:120579143-120579144(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr8:120579626-120579627(+) m6A 3'UTR       25683224 chr8:120579660-120579661(+) m6A 3'UTR       25683224 chr8:120579770-120579771(+) m6A 3'UTR       25412662 chr8:120579893-120579894(+) m6A 3'UTR       25412662 chr8:120579899-120579900(+) m6A 3'UTR       25412662 chr8:120580462-120580463(+) m6A 3'UTR       24981863 chr8:120580769-120580770(+) m6A 3'UTR       24981863 chr8:120580794-120580795(+) m6A 3'UTR       24981863 chr8:120580817-120580818(+) m6A 3'UTR       24981863 chr8:120581177-120581178(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Gse1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar