Detail Information

Basic Information:


  VIRBase ID:  

VHID00623895

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:           Ust:      

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Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-1-3p Ust
miRBase
Accession/Entrez ID
MIMAT0005558 338362
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - D930010O20Rik//UA2//UA2OST

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Ust
chr10:8205445-8205446(-) m6A 3'UTR       24981863//25569111
chr10:8205474-8205475(-) m6A 3'UTR       25683224//24981863//25569111
chr10:8205583-8205584(-) m6A 3'UTR       25569111
chr10:8207270-8207271(-) m6A 3'UTR       25683224//24981863
chr10:8207275-8207276(-) m6A 3'UTR       25683224//24981863
chr10:8207307-8207308(-) m6A 3'UTR       25683224//24981863
chr10:8207485-8207486(-) m6A CDS       25683224//25412662//24981863//25569111
chr10:8207497-8207498(-) m6A CDS       25683224//25412662//24981863//25569111
chr10:8207518-8207519(-) m6A CDS       25683224//25412662//24981863//25569111
chr10:8207548-8207549(-) m6A CDS       25683224//25412662//24981863//25569111
chr10:8207628-8207629(-) m6A CDS       25683224//24981863//25569111
chr10:8207659-8207660(-) m6A CDS       25683224//24981863//25569111
chr10:8245907-8245908(-) m6A CDS       25683224//24981863//25569111
chr10:8246009-8246010(-) m6A CDS       25683224//22608085
chr10:8248105-8248106(-) m6A CDS       25683224//22608085
chr10:8298106-8298107(-) m6A CDS       25683224//22608085
chr10:8298167-8298168(-) m6A CDS       25683224//22608085
chr10:8298197-8298198(-) m6A CDS       25683224//22608085
chr10:8307433-8307434(-) m6A CDS       25683224//22608085
chr10:8307454-8307455(-) m6A CDS       25683224//22608085
chr10:8307481-8307482(-) m6A CDS       25683224//22608085
chr10:8330070-8330071(-) m6A CDS       25683224//22608085
chr10:8390902-8390903(-) m6A CDS       25569111
chr10:8518186-8518187(-) m6A CDS       25569111//22608085
chr10:8518256-8518257(-) m6A CDS       25412662//25569111
chr10:8518482-8518483(-) m6A 5'UTR       25412662//24981863//25569111
chr10:8518573-8518574(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr10:8518611-8518612(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr10:8518706-8518707(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr10:8518791-8518792(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111
chr10:8518796-8518797(-) m6A 5'UTR       25412662//24981863//25569111
chr10:8518802-8518803(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-1-3p
Interactor2: Ust

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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