Basic Information:

  VIRBase ID:  

VHID00623860

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Cdv3:  NM_001134426     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Cdv3
miRBase Accession/Entrez ID	MIMAT0005558	321022
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2510010F10Rik//C230084J24Rik//C79446//TPP//TPP36

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cdv3	chr9:103353302-103353303(-) m6A 3'UTR       24981863 chr9:103353349-103353350(-) m6A 3'UTR       24981863//25569111 chr9:103353355-103353356(-) m6A 3'UTR       24981863//25569111 chr9:103353392-103353393(-) m6A 3'UTR       24981863//25569111 chr9:103353432-103353433(-) m6A 3'UTR       24981863//25569111 chr9:103353474-103353475(-) m6A 3'UTR       24981863//25569111 chr9:103353481-103353482(-) m6A 3'UTR       24981863//25569111 chr9:103353530-103353531(-) m6A 3'UTR       24981863 chr9:103353571-103353572(-) m6A 3'UTR       24981863 chr9:103353668-103353669(-) m6A 3'UTR       24981863//22608085 chr9:103353694-103353695(-) m6A 3'UTR       22608085 chr9:103353705-103353706(-) m6A 3'UTR       22608085 chr9:103354080-103354081(-) m6A 3'UTR       25456834//24981863//25569111 chr9:103354156-103354157(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354186-103354187(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354196-103354197(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354253-103354254(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354281-103354282(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354486-103354487(-) m6A 3'UTR       25456834//24981863//25569111 chr9:103354518-103354519(-) Y 3'UTR//exon       26075521 chr9:103354590-103354591(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354600-103354601(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354749-103354750(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354757-103354758(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354774-103354775(-) Y 3'UTR//exon       26075521 chr9:103354881-103354882(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354904-103354905(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103354909-103354910(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr9:103355058-103355059(-) m6A 3'UTR       24981863 chr9:103355106-103355107(-) m6A 3'UTR       24981863 chr9:103355126-103355127(-) m6A 3'UTR       24981863 chr9:103355217-103355218(-) m6A 3'UTR//CDS       24981863//25456834 chr9:103355228-103355229(-) m6A 3'UTR//CDS       24981863 chr9:103355241-103355242(-) m6A 3'UTR//CDS       24981863 chr9:103355276-103355277(-) m6A 3'UTR//CDS       24981863//25569111 chr9:103355621-103355622(-) m6A 3'UTR//intron       25683224//24981863//25456834 chr9:103355686-103355687(-) m6A 3'UTR//intron       25683224//24981863//25456834//25569111 chr9:103355733-103355734(-) m6A 3'UTR//intron       25683224//24981863//25456834//25569111 chr9:103355788-103355789(-) m6A 3'UTR//intron       25683224//24981863//25456834//25569111 chr9:103355822-103355823(-) m6A 3'UTR//intron       25683224//24981863//25456834//25569111 chr9:103355834-103355835(-) m6A 3'UTR//intron       25683224//24981863//25456834//25569111 chr9:103355960-103355961(-) m6A 3'UTR//intron       24981863//25456834//25569111//22608085 chr9:103356350-103356351(-) m6A CDS       24981863//25569111 chr9:103356430-103356431(-) m6A CDS       24981863 chr9:103359911-103359912(-) m6A CDS       24981863//25456834 chr9:103359961-103359962(-) m1A CDS       26863196 chr9:103364077-103364078(-) m6A exon//intron       25683224//24981863 chr9:103365310-103365311(-) m1A CDS       26863196 chr9:103365318-103365319(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr9:103365339-103365340(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr9:103365358-103365359(-) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr9:103365376-103365377(-) m6A 5'UTR       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Cdv3	Exosome Mast cells     17486113 Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Cdv3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar