Detail Information

Basic Information:


  VIRBase ID:  

VHID00623793

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:           Wdr59:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mcmv-miR-m108-1-3p Wdr59
miRBase
Accession/Entrez ID
MIMAT0005558 319481
Organism Murid betaherpesvirus 1 Mus musculus
Category miRNA mRNA
Alias - 5430401O09Rik//Cdw12

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Wdr59
chr8:111449969-111449970(-) m6A 3'UTR       24981863//25569111
chr8:111449974-111449975(-) m6A 3'UTR       24981863//25569111
chr8:111449984-111449985(-) m6A 3'UTR       24981863//25569111
chr8:111450216-111450217(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr8:111450281-111450282(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr8:111450320-111450321(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr8:111450450-111450451(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:111450491-111450492(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:111450502-111450503(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:111450706-111450707(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:111450752-111450753(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr8:111450805-111450806(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:111450833-111450834(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr8:111450842-111450843(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr8:111450902-111450903(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:111498596-111498597(-) m6A CDS       22608085
chr8:111498606-111498607(-) m6A CDS       22608085
chr8:111501063-111501064(-) m6A CDS       22608085
chr8:111501108-111501109(-) m6A CDS       22608085
chr8:111505921-111505922(-) m6A CDS       25412662//25569111
chr8:111521934-111521935(-) m6A CDS       25683224//25412662//24981863//25569111
chr8:111522042-111522043(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mcmv-miR-m108-1-3p
Interactor2: Wdr59

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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