Basic Information:

  VIRBase ID:  

VHID00623720

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Tox4:  NM_023434     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Tox4
miRBase Accession/Entrez ID	MIMAT0005558	268741
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	5730589K01Rik//A630040M18//AA410149//LCP1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Tox4	chr14:52913932(+) A-I      3'UTR chr14:52913037(+) A-I      3'UTR chr14:52913892(+) A-I      3'UTR chr14:52913891(+) A-I      3'UTR chr14:52913904(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Tox4	chr14:52294229(+) C-I intron -    22448268 chr14:52294216(+) A-I intron -    22524474 chr14:52294217(+) A-I intron -    22524474 chr14:52294229(+) A-I intron -    22524474   //16940548 chr14:52293362(+) A-I intron -    16940548 chr14:52294257(+) A-I intron -    16940548

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tox4	chr14:52279582-52279583(+) m6A 5'UTR//exon       25456834//25412662//24981863//25569111//22575960 chr14:52285824-52285825(+) m6A CDS//exon       25569111//22608085 chr14:52285831-52285832(+) m6A CDS//exon       25569111//22608085 chr14:52286798-52286799(+) m6A CDS//exon       24981863//25569111//22608085 chr14:52286820-52286821(+) m6A CDS//exon       24981863//25569111//22608085 chr14:52286853-52286854(+) m6A CDS//exon       25569111//22608085 chr14:52287118-52287119(+) m6A exon//intron       25412662 chr14:52287318-52287319(+) m6A CDS//exon       25412662//24981863 chr14:52287333-52287334(+) m6A CDS//exon       25412662//24981863 chr14:52287376-52287377(+) m6A CDS//exon       25412662//24981863//22608085 chr14:52287386-52287387(+) m6A CDS//exon       25412662//24981863//22608085 chr14:52287449-52287450(+) m6A CDS//exon       25412662//24981863 chr14:52287454-52287455(+) m6A CDS//exon       24981863//25412662 chr14:52287505-52287506(+) m6A CDS//exon       24981863 chr14:52287521-52287522(+) m6A CDS//exon       24981863 chr14:52290775-52290776(+) m6A CDS//exon       24981863 chr14:52290824-52290825(+) m6A CDS//exon       24981863 chr14:52291698-52291699(+) m6A CDS//exon       24981863//25569111 chr14:52291795-52291796(+) m6A CDS//exon       25412662//24981863//25569111 chr14:52292089-52292090(+) m6A CDS//exon       24981863//25456834//25569111 chr14:52292138-52292139(+) m6A CDS//exon       24981863//25569111 chr14:52292182-52292183(+) m6A CDS//exon       24981863 chr14:52292613-52292614(+) m6A CDS       25683224//22608085 chr14:52292634-52292635(+) m6A CDS       25683224//22608085 chr14:52292640-52292641(+) m6A CDS       25683224//22608085 chr14:52293238-52293239(+) m6A CDS       25683224//24981863 chr14:52293348-52293349(+) m6A 3'UTR       25569111 chr14:52293383-52293384(+) m6A 3'UTR       25569111 chr14:52293396-52293397(+) m6A 3'UTR       25569111 chr14:52293412-52293413(+) m6A 3'UTR       25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Tox4

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar