Basic Information:

  VIRBase ID:  

VHID00623610

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Cers6:  NM_001347161     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Cers6
miRBase Accession/Entrez ID	MIMAT0005558	241447
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	4732462C07Rik//AW544719//Cer//L//Lass6//T1//T1L

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cers6	chr2:68861625-68861626(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr2:68861702-68861703(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr2:68861711-68861712(+) m6A CDS//exon       25412662//25569111 chr2:68861744-68861745(+) m6A CDS//exon       25569111 chr2:69021390-69021391(+) m6A intron       24981863 chr2:69021400-69021401(+) m6A intron       24981863 chr2:69021434-69021435(+) m6A intron       24981863 chr2:69021475-69021476(+) m6A intron       24981863 chr2:69105755-69105756(+) m6A CDS//intron       24981863 chr2:69108490-69108491(+) m6A CDS       25683224//24981863 chr2:69108512-69108513(+) m6A CDS       25683224//24981863 chr2:69108540-69108541(+) m6A CDS       25683224//24981863 chr2:69108603-69108604(+) m6A 3'UTR       25683224//25456834//24981863//22608085 chr2:69108617-69108618(+) m6A 3'UTR       25683224//25456834//24981863 chr2:69108626-69108627(+) m6A 3'UTR       25683224//25456834//24981863 chr2:69108695-69108696(+) m6A 3'UTR       25456834//24981863 chr2:69109927-69109928(+) m6A 3'UTR       24981863 chr2:69109947-69109948(+) m6A 3'UTR       24981863 chr2:69109952-69109953(+) m6A 3'UTR       24981863 chr2:69109979-69109980(+) m6A 3'UTR       24981863 chr2:69110011-69110012(+) m6A 3'UTR       24981863 chr2:69110023-69110024(+) m6A 3'UTR       24981863 chr2:69110028-69110029(+) m6A 3'UTR       24981863 chr2:69110035-69110036(+) m6A 3'UTR       24981863 chr2:69110065-69110066(+) m6A 3'UTR       24981863 chr2:69110095-69110096(+) m6A 3'UTR       24981863 chr2:69110177-69110178(+) m6A 3'UTR       24981863 chr2:69110188-69110189(+) m6A 3'UTR       24981863 chr2:69111352-69111353(+) m6A 3'UTR       24981863 chr2:69111442-69111443(+) m6A 3'UTR       24981863 chr2:69111477-69111478(+) m6A 3'UTR       24981863 chr2:69111625-69111626(+) m6A 3'UTR       24981863//22608085 chr2:69111633-69111634(+) m6A 3'UTR       24981863//22608085 chr2:69111689-69111690(+) m6A 3'UTR       24981863//22608085 chr2:69111709-69111710(+) m6A 3'UTR       24981863//22608085 chr2:69111719-69111720(+) m6A 3'UTR       24981863//22608085 chr2:69111757-69111758(+) m6A 3'UTR       24981863//22608085 chr2:69112041-69112042(+) m6A 3'UTR       24981863//22608085 chr2:69112059-69112060(+) m6A 3'UTR       24981863//22608085 chr2:69112612-69112613(+) m6A 3'UTR       24981863//25569111 chr2:69112617-69112618(+) m6A 3'UTR       24981863//25569111 chr2:69112738-69112739(+) m6A 3'UTR       24981863 chr2:69112846-69112847(+) m6A 3'UTR       24981863 chr2:69112939-69112940(+) m6A 3'UTR       25412662//24981863//25569111 chr2:69113034-69113035(+) m6A 3'UTR       25456834//25412662//25569111 chr2:69113086-69113087(+) m6A 3'UTR       25456834//25412662//25569111 chr2:69113138-69113139(+) m6A 3'UTR       25456834//25412662//25569111 chr2:69113190-69113191(+) m6A 3'UTR       25412662//25569111 chr2:69113242-69113243(+) m6A 3'UTR       25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Cers6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar