Basic Information:

  VIRBase ID:  

VHID00623587

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Arid1b:  NM_001085355     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Arid1b
miRBase Accession/Entrez ID	MIMAT0005558	239985
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	8030481M12//9330189K18Rik//AI836955//Ardi1b//B230217J03Rik//BAF250B//mKIAA1235

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arid1b	chr17:4995100-4995101(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr17:4995123-4995124(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr17:4995260-4995261(+) m6A CDS//intron       25412662//24981863//25569111 chr17:4995389-4995390(+) m6A CDS//intron       25412662//24981863//25569111 chr17:4995422-4995423(+) m6A CDS//intron       25412662//24981863//25569111 chr17:4995474-4995475(+) m6A CDS//intron       25412662//24981863//25569111 chr17:4995699-4995700(+) m6A CDS//intron       25456834//25412662//24981863//25569111 chr17:4995767-4995768(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr17:4995779-4995780(+) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111 chr17:4996181-4996182(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr17:4996252-4996253(+) Y CDS//exon//intron       26075521 chr17:4996382-4996383(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr17:4996470-4996471(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr17:5040592-5040593(+) m6A CDS//exon       25412662//24981863//25569111 chr17:5040611-5040612(+) m6A CDS//exon       25412662//24981863//25569111 chr17:5097590-5097591(+) m6A CDS//exon       25412662//24981863//25569111 chr17:5126937-5126938(+) m6A CDS//exon       25569111 chr17:5126983-5126984(+) m6A CDS//exon       25569111 chr17:5279374-5279375(+) m6A CDS       22608085 chr17:5290969-5290970(+) m6A CDS       22608085 chr17:5291055-5291056(+) m6A CDS       24981863 chr17:5291120-5291121(+) m6A CDS       24981863 chr17:5291137-5291138(+) m6A CDS       24981863 chr17:5291219-5291220(+) m6A CDS       25412662 chr17:5291267-5291268(+) m6A CDS       25412662 chr17:5305771-5305772(+) m6A CDS       25412662 chr17:5305819-5305820(+) m6A CDS       25412662 chr17:5314017-5314018(+) m6A CDS//intron       25412662 chr17:5327304-5327305(+) m6A CDS       - chr17:5327387-5327388(+) m6A CDS       - chr17:5327713-5327714(+) m6A CDS       24981863 chr17:5327761-5327762(+) m6A CDS       25683224//24981863//22608085 chr17:5327786-5327787(+) m6A CDS       25683224//24981863//22608085 chr17:5327797-5327798(+) m6A CDS       25683224//24981863//22608085 chr17:5332520-5332521(+) m6A CDS       25683224//24981863 chr17:5332546-5332547(+) m6A CDS       25683224//25569111 chr17:5332595-5332596(+) m6A CDS       25683224//25569111 chr17:5332620-5332621(+) m6A CDS       25683224//25569111 chr17:5334978-5334979(+) m6A CDS       25683224//25569111 chr17:5335011-5335012(+) m6A CDS       25683224//24981863//25569111 chr17:5335029-5335030(+) m6A CDS       25683224//24981863//25569111 chr17:5336582-5336583(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr17:5336657-5336658(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:5336676-5336677(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:5336801-5336802(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr17:5336894-5336895(+) m6A CDS       25683224//25412662//24981863//25569111 chr17:5337056-5337057(+) m6A CDS       25683224//25412662//24981863//25569111 chr17:5337276-5337277(+) m6A CDS       25683224//24981863//25569111 chr17:5339287-5339288(+) m6A CDS       25683224//25569111 chr17:5341379-5341380(+) m6A CDS       25683224//24981863//25569111 chr17:5341588-5341589(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr17:5341654-5341655(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr17:5341720-5341721(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr17:5341738-5341739(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr17:5341830-5341831(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr17:5342008-5342009(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:5342021-5342022(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:5342028-5342029(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:5342080-5342081(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr17:5342152-5342153(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342185-5342186(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342237-5342238(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342316-5342317(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342341-5342342(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342380-5342381(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342425-5342426(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342443-5342444(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342530-5342531(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342576-5342577(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342589-5342590(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342600-5342601(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342614-5342615(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:5342626-5342627(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr17:5342746-5342747(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342761-5342762(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342900-5342901(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342914-5342915(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5342968-5342969(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5343031-5343032(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5343116-5343117(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr17:5343247-5343248(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr17:5343576-5343577(+) m6A 3'UTR       24981863 chr17:5343612-5343613(+) m6A 3'UTR       24981863//26404942 chr17:5343721-5343722(+) m6A 3'UTR       24981863 chr17:5344260-5344261(+) m6A 3'UTR       24981863//26404942//22608085 chr17:5344296-5344297(+) m6A 3'UTR       24981863//26404942 chr17:5344314-5344315(+) m6A 3'UTR       24981863//26404942 chr17:5344410-5344411(+) m6A 3'UTR       24981863 chr17:5344652-5344653(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Arid1b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar