Basic Information:

  VIRBase ID:  

VHID00623555

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Gas2l3:  NM_001284344     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Gas2l3
miRBase Accession/Entrez ID	MIMAT0005558	237436
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	8430435B07Rik//Gm240

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gas2l3	chr10:89409894-89409895(-) m6A 3'UTR       25456834 chr10:89409979-89409980(-) m6A 3'UTR       25456834 chr10:89411163-89411164(-) m6A 3'UTR       24981863 chr10:89411181-89411182(-) m6A 3'UTR       24981863 chr10:89411269-89411270(-) m6A 3'UTR       24981863 chr10:89411958-89411959(-) Y 3'UTR//exon       26075521 chr10:89412870-89412871(-) m6A 3'UTR       - chr10:89412922-89412923(-) m6A 3'UTR       25683224//25569111 chr10:89412961-89412962(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr10:89413036-89413037(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr10:89413061-89413062(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr10:89413101-89413102(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr10:89413290-89413291(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:89413317-89413318(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:89413387-89413388(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:89413408-89413409(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:89413414-89413415(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:89413484-89413485(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:89413605-89413606(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89413628-89413629(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89413684-89413685(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:89413705-89413706(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:89413809-89413810(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:89413847-89413848(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:89413862-89413863(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:89413895-89413896(-) m6A CDS       25456834//24981863//25569111//22608085 chr10:89413942-89413943(-) m6A CDS       25456834//24981863//25569111//22608085 chr10:89413951-89413952(-) m6A CDS       25456834//24981863//25569111//22608085 chr10:89414009-89414010(-) m6A CDS       25456834//24981863//25569111//22608085 chr10:89414213-89414214(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89414223-89414224(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89414252-89414253(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89414264-89414265(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89414295-89414296(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89414381-89414382(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:89414477-89414478(-) m6A CDS       25683224//25569111 chr10:89417107-89417108(-) m6A CDS       25683224 chr10:89417121-89417122(-) m6A CDS       25683224 chr10:89421468-89421469(-) m6A CDS       25683224 chr10:89436548-89436549(-) m6A 5'UTR       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Gas2l3	Nucleus Neuroblastoma cell line (N2A)     22406755 Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Gas2l3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar