Basic Information:

  VIRBase ID:  

VHID00623545

  Virus:  

Murid betaherpesvirus 1

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mcmv-miR-m108-1-3p:  MIMAT0005558          Plxnb1:  NM_172775     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mcmv-miR-m108-1-3p	Plxnb1
miRBase Accession/Entrez ID	MIMAT0005558	235611
Organism	Murid betaherpesvirus 1	Mus musculus
Category	miRNA	mRNA
Alias	-	2900002G15Rik//AU042020//mKIAA0407

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Plxnb1	chr9:109095543-109095544(+) m6A 5'UTR       25412662 chr9:109096067-109096068(+) m6A 5'UTR//intron       25683224//25569111 chr9:109096090-109096091(+) m6A 5'UTR//intron       25683224//25569111 chr9:109100198-109100199(+) m6A CDS       25683224//25569111 chr9:109100451-109100452(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:109100492-109100493(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:109100654-109100655(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr9:109100683-109100684(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:109100783-109100784(+) m6A CDS       25683224//25569111 chr9:109100799-109100800(+) Y CDS//exon       26075521 chr9:109100840-109100841(+) m6A CDS       25683224//24981863//25569111 chr9:109101028-109101029(+) m6A CDS       25683224//24981863 chr9:109101065-109101066(+) m6A CDS       25683224//24981863 chr9:109102866-109102867(+) m6A CDS       25683224 chr9:109102893-109102894(+) m6A CDS       25683224 chr9:109103243-109103244(+) m6A CDS       25683224//22608085 chr9:109103283-109103284(+) m6A CDS       25683224//22608085 chr9:109103679-109103680(+) m6A CDS       25683224//22608085 chr9:109103733-109103734(+) m6A CDS       25683224//22608085 chr9:109104771-109104772(+) m6A CDS       25683224//25412662 chr9:109104802-109104803(+) m6A CDS       25412662 chr9:109105319-109105320(+) m6A CDS//intron       25683224//25412662 chr9:109106226-109106227(+) m6A exon//intron       25683224 chr9:109106286-109106287(+) m6A CDS//exon//intron       25683224 chr9:109106333-109106334(+) m6A CDS//exon//intron       25683224 chr9:109106465-109106466(+) m6A CDS//exon       25683224 chr9:109106473-109106474(+) m6A CDS//exon       25683224 chr9:109106490-109106491(+) m6A CDS//exon       25683224 chr9:109106574-109106575(+) m6A CDS//exon       25683224 chr9:109106847-109106848(+) m6A CDS//exon       25683224//22608085 chr9:109108192-109108193(+) m6A CDS//exon       25683224//22608085 chr9:109108506-109108507(+) m6A CDS//exon       25683224//25412662//22608085 chr9:109108527-109108528(+) m6A CDS//exon       25683224//25412662 chr9:109109248-109109249(+) m6A CDS       25683224//25412662//24981863 chr9:109109511-109109512(+) m6A CDS       25683224//25412662 chr9:109110362-109110363(+) m6A CDS       25683224 chr9:109111483-109111484(+) m6A CDS       25683224//22608085 chr9:109111513-109111514(+) m6A CDS       25683224//22608085 chr9:109111534-109111535(+) m6A CDS       25683224//22608085 chr9:109111841-109111842(+) m6A CDS       25683224//22608085 chr9:109112003-109112004(+) m6A CDS       25683224//22608085 chr9:109112066-109112067(+) m6A CDS       25683224//22608085 chr9:109112077-109112078(+) m6A CDS       25683224//22608085 chr9:109112117-109112118(+) m6A CDS       25683224//22608085 chr9:109112269-109112270(+) m6A CDS       25683224//22608085 chr9:109112559-109112560(+) m6A CDS       25683224 chr9:109112574-109112575(+) m6A CDS       25683224 chr9:109113353-109113354(+) m6A CDS       25683224//22608085 chr9:109113392-109113393(+) m6A CDS       25683224//22608085 chr9:109114249-109114250(+) m6A CDS       25683224//25412662 chr9:109114317-109114318(+) m6A CDS       25683224//25412662 chr9:109114677-109114678(+) m6A CDS       25683224//22608085 chr9:109115523-109115524(+) m6A CDS       25683224//22608085 chr9:109115556-109115557(+) m6A CDS       25683224//22608085 chr9:109115705-109115706(+) m6A CDS       25683224//22608085 chr9:109115712-109115713(+) m6A CDS       25683224//22608085 chr9:109115744-109115745(+) m6A CDS       25683224//22608085 chr9:109117924-109117925(+) m6A CDS       25683224//25456834//24981863//25569111 chr9:109117946-109117947(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr9:109118115-109118116(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:109118135-109118136(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:109118229-109118230(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:109118279-109118280(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:109118339-109118340(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:109118526-109118527(+) m6A 3'UTR       25683224//25412662//24981863 chr9:109118560-109118561(+) m6A 3'UTR       25683224//25412662//24981863 chr9:109118642-109118643(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111 chr9:109118669-109118670(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111 chr9:109118806-109118807(+) m6A 3'UTR       25683224//24981863 chr9:109119134-109119135(+) m6A 3'UTR       25683224//22608085

Interaction Network (The top 100 interactions):

Interactor1: mcmv-miR-m108-1-3p
Interactor2: Plxnb1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar